RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 RFFLQ8WZ73 363 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
COL4A1-202ENST00000467182 ZNF518BQ9C0D4 1074 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 CRTAC1Q9NQ79 661 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 DDX43Q9NXZ2 648 aaKnown RBP13.8□□□□□ -0.2
COL4A1-202ENST00000467182 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 TSPAN16Q9UKR8 245 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 COG5Q9UP83 839 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 NLRC5Q86WI3 1866 aa13.8□□□□□ -0.2
COL4A1-202ENST00000467182 TCRBV5S1A1TA0A578 114 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 BUB1O43683 1085 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 MTA2O94776 668 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PTPN1P18031 435 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 MMP8P22894 467 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 TKTP29401 623 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 NSFP46459 744 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 HADHBP55084 474 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 GPC5P78333 572 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 FPGSQ05932 587 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PPIGQ13427 754 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 STILQ15468 1287 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PAQR9Q6ZVX9 377 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 B3GALNT2Q8NCR0 500 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 TMEM35BQ8NCS4 154 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 VCPIP1Q96JH7 1222 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PKMYT1Q99640 499 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 AVENQ9NQS1 362 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 DNAI1Q9UI46 699 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
COL4A1-202ENST00000467182 MKI67P46013 3256 aaKnown RBP13.79□□□□□ -0.2
COL4A1-202ENST00000467182 GRID2IPA4D2P6 1211 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 M0QYV0 167 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 CCDC130P13994 396 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 RRM1P23921 792 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 PBX3P40426 434 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 BCAR1P56945 870 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 TMEM240Q5SV17 173 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 LLGL2Q6P1M3 1020 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 MMS22LQ6ZRQ5 1243 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 LRRC57Q8N9N7 239 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 TPCN2Q8NHX9 752 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 UBA3Q8TBC4 463 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 ZNF653Q96CK0 615 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 ACBD6Q9BR61 282 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 C11orf70Q9BRQ4 267 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 COLEC11Q9BWP8 271 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 TJP2Q9UDY2 1190 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
COL4A1-202ENST00000467182 CHORDC1Q9UHD1 332 aaPredicted RBP13.78□□□□□ -0.2
COL4A1-202ENST00000467182 ADAM28Q9UKQ2 775 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 DSEQ9UL01 958 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 CDH9Q9ULB4 789 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 PTPRDP23468 1912 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 MYH10P35580 1976 aa13.78□□□□□ -0.2
COL4A1-202ENST00000467182 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 TULP2O00295 520 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 GABBR2O75899 941 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 FGBP02675 491 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 ALDH2P05091 517 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 MYBL1P10243 752 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 SYN1P17600 705 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 GABRB2P47870 512 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 RPL34P49207 117 aaKnown RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 GSCP56915 257 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 PLEKHA7Q6IQ23 1121 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 FAM171BQ6P995 826 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 SLFN11Q7Z7L1 901 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 RHOT2Q8IXI1 618 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 RNF168Q8IYW5 571 aaPredicted RBP13.77□□□□□ -0.21
COL4A1-202ENST00000467182 FUKQ8N0W3 1084 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 SLC2A14Q8TDB8 520 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 SLC35F5Q8WV83 523 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 TRIM11Q96F44 468 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 ABHD8Q96I13 439 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 NOX5Q96PH1 765 aa13.77□□□□□ -0.21
COL4A1-202ENST00000467182 TMEM209Q96SK2 561 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms