RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 FAM160B1Q5W0V3 765 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 ICE2Q659A1 982 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 TMEM108Q6UXF1 575 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 HEATR3Q7Z4Q2 680 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 CPA6Q8N4T0 437 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 RGMAQ96B86 450 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 REPS1Q96D71 796 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 FAM167AQ96KS9 214 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 BHMT2Q9H2M3 363 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 SERHLQ9NQF3 203 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 ABCF2Q9UG63 623 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 SH2B3Q9UQQ2 575 aa5.07□□□□□ -1.6
CHMP2B-202ENST00000466696 TNKSO95271 1327 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 H0YIZ8 118 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 PPP6CO00743 305 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 ZNF213O14771 459 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 TP73O15350 636 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 SLC16A3O15427 465 aaKnown RBP5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 BMP15O95972 392 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 PDCP20941 246 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 CDKN1CP49918 316 aaPredicted RBP5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 EEFSECP57772 596 aaKnown RBP5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 PRAMEF17Q5VTA0 474 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 ZNF66Q6ZN08 573 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 YTHDF3Q7Z739 585 aaKnown RBP5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 SPEF1Q9Y4P9 236 aa5.06□□□□□ -1.6
CHMP2B-202ENST00000466696 TISP43B9A030 160 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 ZRANB2O95218 330 aaKnown RBP eCLIP5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 FTLP02792 175 aaPredicted RBP5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 TUBB4AP04350 444 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 PDHA1P08559 390 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 MPGP29372 298 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 CYP2C18P33260 490 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 KLF9Q13886 244 aaPredicted RBP5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 FAM50AQ14320 339 aaKnown RBP5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 ETFDHQ16134 617 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 SLC9A4Q6AI14 798 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 LAYNQ6UX15 382 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 PRR18Q8N4B5 295 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 FAM46DQ8NEK8 389 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 DENND1AQ8TEH3 1009 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 LMBRD1Q9NUN5 540 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 DLL3Q9NYJ7 618 aa5.05□□□□□ -1.6
CHMP2B-202ENST00000466696 SMIM22K7EJ46 135 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 MYO1FO00160 1098 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 IKBKBO14920 756 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 IL6RP08887 468 aaPredicted RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 ATXN1LP0C7T5 689 aaKnown RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 CYP2D6P10635 497 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 PIM1P11309 404 aaPredicted RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 TYRP14679 529 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 RECQLP46063 649 aaPredicted RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 LOXL3P58215 753 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 BOP1Q14137 746 aaKnown RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 PCID2Q5JVF3 399 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 TREML2Q5T2D2 321 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 SLC18B1Q6NT16 456 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 USP45Q70EL2 814 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 MAVSQ7Z434 540 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 PRPF38AQ8NAV1 312 aaKnown RBP5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 SLC46A1Q96NT5 459 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 TBC1D30Q9Y2I9 924 aa5.04□□□□□ -1.6
CHMP2B-202ENST00000466696 ZNF521Q96K83 1311 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 PRRT4C9JH25 899 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 MOSPD3O75425 235 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 IGKV2-30P06310 120 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 PPIFP30405 207 aaKnown RBP5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 LIPAP38571 399 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 ZNF134P52741 427 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 LONRF3Q496Y0 759 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 AMOTQ4VCS5 1084 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 PPP1R3BQ86XI6 285 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 ZBTB9Q96C00 473 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 PTDSS2Q9BVG9 487 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 QTRT1Q9BXR0 403 aaKnown RBP5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 TTYH3Q9C0H2 523 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 DUSP22Q9NRW4 184 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 HESX1Q9UBX0 185 aa5.03□□□□□ -1.6
CHMP2B-202ENST00000466696 DNAJB5O75953 348 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 SNUPNO95149 360 aaKnown RBP5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 AHSGP02765 367 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 PXNP49023 591 aaPredicted RBP5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 CLCN2P51788 898 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 MAP2K6P52564 334 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 PDE1AP54750 535 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 KRTAP10-9P60411 292 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 HOXA4Q00056 320 aaPredicted RBP5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 AMPD3Q01432 767 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 GTF2H3Q13889 308 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 IQCB1Q15051 598 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 SUPT20HL1Q3ZLR7 823 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 EMC10Q5UCC4 262 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 LRRC71Q8N4P6 559 aa5.02□□□□□ -1.61
CHMP2B-202ENST00000466696 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms