RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PLCB4Q15147 1175 aa10.98□□□□□ -0.65
UFD1-206ENST00000466373 TAF5Q15542 800 aa10.98□□□□□ -0.65
UFD1-206ENST00000466373 Q3C1V9 767 aa10.98□□□□□ -0.65
UFD1-206ENST00000466373 NOL9Q5SY16 702 aaKnown RBP10.98□□□□□ -0.65
UFD1-206ENST00000466373 SYCP2LQ5T4T6 812 aa10.98□□□□□ -0.65
UFD1-206ENST00000466373 PDGFCQ9NRA1 345 aa10.98□□□□□ -0.65
UFD1-206ENST00000466373 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
UFD1-206ENST00000466373 BRCA1P38398 1863 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 LSM8O95777 96 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 MXD4Q14582 209 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 ITIH4Q14624 930 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 LACTB2Q53H82 288 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 MPZL3Q6UWV2 235 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 SUGP1Q8IWZ8 645 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 DHX37Q8IY37 1157 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 C4orf33Q8N1A6 199 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 TWNKQ96RR1 684 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 ASCC2Q9H1I8 757 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.65
UFD1-206ENST00000466373 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 SIP14410 1827 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 CST8O60676 142 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 LRCH4O75427 683 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 UBOX5O94941 541 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 TGFB3P10600 412 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 KRT15P19012 456 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 AP3M2P53677 418 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 VCPP55072 806 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 OTUD4Q01804 1114 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 LMNB2Q03252 620 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 PDIA2Q13087 525 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 STAT4Q14765 748 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 OASLQ15646 514 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 CDCA2Q69YH5 1023 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 TBC1D1Q86TI0 1168 aaPredicted RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 ANKRD36BP1Q96IX9 119 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 METTL5Q9NRN9 209 aaKnown RBP10.97□□□□□ -0.65
UFD1-206ENST00000466373 AGAP1Q9UPQ3 857 aa10.97□□□□□ -0.65
UFD1-206ENST00000466373 SOCS7O14512 581 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 ITGB3P05106 788 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
UFD1-206ENST00000466373 GCAP28676 217 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 CKAP2Q8WWK9 683 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 TCP11Q8WWU5 503 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 HSPH1Q92598 858 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 FAM167AQ96KS9 214 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 SDCBP2Q9H190 292 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 RNPEPQ9H4A4 650 aa10.96□□□□□ -0.65
UFD1-206ENST00000466373 GPR25O00155 361 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 ACKR2O00590 384 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 FOXN2P32314 431 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 R3HDM1Q15032 1099 aaKnown RBP10.96□□□□□ -0.66
UFD1-206ENST00000466373 PKN2Q16513 984 aaKnown RBP10.96□□□□□ -0.66
UFD1-206ENST00000466373 ZNF667Q5HYK9 610 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 CELF3Q5SZQ8 465 aaKnown RBP10.96□□□□□ -0.66
UFD1-206ENST00000466373 ANKRD22Q5VYY1 191 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 PNMA8AQ86V59 439 aaPredicted RBP10.96□□□□□ -0.66
UFD1-206ENST00000466373 KCNN1Q92952 543 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 CPB2Q96IY4 423 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 FGD4Q96M96 766 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 CDT1Q9H211 546 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.66
UFD1-206ENST00000466373 SIX4Q9UIU6 781 aa10.96□□□□□ -0.66
UFD1-206ENST00000466373 TCEA3O75764 348 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 ERBB2P04626 1255 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 TXNP10599 105 aaKnown RBP10.95□□□□□ -0.66
UFD1-206ENST00000466373 SSTR1P30872 391 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 WDR4P57081 412 aaKnown RBP10.95□□□□□ -0.66
UFD1-206ENST00000466373 EFTUD2Q15029 972 aaKnown RBP eCLIP10.95□□□□□ -0.667e-8■■■■□ 22.5
UFD1-206ENST00000466373 RAB6CQ53S08 254 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 PPP1R2P3Q6NXS1 205 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 ARHGEF18Q6ZSZ5 1173 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 TSHZ1Q6ZSZ6 1077 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 PARP9Q8IXQ6 854 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 C1orf127Q8N9H9 656 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 MAML1Q92585 1016 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 SGSM3Q96HU1 749 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 CALN1Q9BXU9 219 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 RAB6CQ9H0N0 254 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 PTPRHQ9HD43 1115 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 LGALS13Q9UHV8 139 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 PNMA3Q9UL41 463 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 WDR90Q96KV7 1748 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 PTPRFP10586 1907 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 LACTBL1A8MY62 500 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 GRAP2O75791 330 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 SUN1O94901 812 aa10.95□□□□□ -0.66
UFD1-206ENST00000466373 RAD23BP54727 409 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms