RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 C1orf220Q5T0J3 134 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 IER5LQ5T953 404 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 ANKRD40Q6AI12 368 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 SPATA2LQ8IUW3 424 aaPredicted RBP10.9□□□□□ -0.66
CD40-204ENST00000466205 SCN4BQ8IWT1 228 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 SUGP1Q8IWZ8 645 aaKnown RBP10.9□□□□□ -0.66
CD40-204ENST00000466205 UBALD2Q8IYN6 164 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 SHKBP1Q8TBC3 707 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 SPPL2BQ8TCT7 592 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 SYAP1Q96A49 352 aaPredicted RBP10.9□□□□□ -0.66
CD40-204ENST00000466205 XYLT2Q9H1B5 865 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 ATXN3LQ9H3M9 355 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 MFSD1Q9H3U5 465 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 MAFFQ9ULX9 164 aa10.9□□□□□ -0.66
CD40-204ENST00000466205 NOTCH4Q99466 2003 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 A8MXQ7 604 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 STK25O00506 426 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 ZNF197O14709 1029 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 HLA-DRAP01903 254 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 WARSP23381 471 aaKnown RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 RPL13P26373 211 aaKnown RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 PCSK1P29120 753 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 GNL1P36915 607 aaPredicted RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 TUFMP49411 452 aaKnown RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 STX17P56962 302 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 UBE2HP62256 183 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 GPC5P78333 572 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 PPP3CAQ08209 521 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 VEPH1Q14D04 833 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 ZNF667Q5HYK9 610 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 MDH1BQ5I0G3 518 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 FAM78AQ5JUQ0 283 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 TANGO2Q6ICL3 276 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 MTSS1LQ765P7 747 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 DPH6Q7L8W6 267 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 ADSSL1Q8N142 457 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 SIX5Q8N196 739 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 ZSCAN18Q8TBC5 510 aaPredicted RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 C2orf15Q8WU43 125 aaKnown RBP10.89□□□□□ -0.67
CD40-204ENST00000466205 PSMG2Q969U7 264 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 PKMYT1Q99640 499 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 TSG101Q99816 390 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 LRRC3Q9BY71 257 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 SDCBP2Q9H190 292 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 CRTAC1Q9NQ79 661 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 CTNND2Q9UQB3 1225 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 HCN4Q9Y3Q4 1203 aa10.89□□□□□ -0.67
CD40-204ENST00000466205 NCANO14594 1321 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 CLDN5O00501 218 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 CETN3O15182 167 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 EPB41P11171 864 aaKnown RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 SRFP11831 508 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 BMP6P22004 513 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 RFX1P22670 979 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 BDNFP23560 247 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 ATICP31939 592 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 VIPR2P41587 438 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 AP3M2P53677 418 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 CLDN10P78369 228 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 IFRD2Q12894 506 aaPredicted RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 NFE2Q16621 373 aaPredicted RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 NFIL3Q16649 462 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 ZACNQ401N2 412 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 GPR158Q5T848 1215 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 INTS8Q75QN2 995 aaKnown RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 GAREM2Q75VX8 874 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 ITIH5Q86UX2 942 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 FBXL6Q8N531 539 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 TTC16Q8NEE8 873 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 SPATA20Q8TB22 786 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 TAS1R2Q8TE23 839 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 PCED1BQ96HM7 432 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 SMG9Q9H0W8 520 aaKnown RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 AVENQ9NQS1 362 aaPredicted RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
CD40-204ENST00000466205 ZFP37Q9Y6Q3 630 aaPredicted RBP10.88□□□□□ -0.67
CD40-204ENST00000466205 KRBA1A5PL33 1030 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 PSMA7O14818 248 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 TACC1O75410 805 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 STAU1O95793 577 aaKnown RBP10.87□□□□□ -0.67
CD40-204ENST00000466205 FCARP24071 287 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 GRIK1P39086 918 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 CACNA2D1P54289 1103 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 EPHA5P54756 1037 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 SMARCB1Q12824 385 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 STIM1Q13586 685 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 EDRF1Q3B7T1 1238 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
CD40-204ENST00000466205 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 LIMS2Q7Z4I7 341 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 LEMD2Q8NC56 503 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 TMEM174Q8WUU8 243 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 NELFBQ8WX92 580 aa10.87□□□□□ -0.67
CD40-204ENST00000466205 ASB16Q96NS5 453 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms