RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FOXR2Q6PJQ5 311 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 LEMD2Q8NC56 503 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 TAS1R2Q8TE23 839 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 NELFBQ8WX92 580 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 MYLPFQ96A32 169 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 LPIN3Q9BQK8 851 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 PI4K2AQ9BTU6 479 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 C1QTNF1Q9BXJ1 281 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 NUP62CLQ9H1M0 184 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 SMOC2Q9H3U7 446 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 C11orf16Q9NQ32 467 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 CDH7Q9ULB5 785 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 WDFY4Q6ZS81 3184 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 BICDL2A1A5D9 508 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 MYBPHLA2RUH7 354 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 LAMP2P13473 410 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 P4HA1P13674 534 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 LMO2P25791 158 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 GTF2H1P32780 548 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ASPAP45381 313 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 TUFMP49411 452 aaKnown RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ZXDAP98168 799 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 HTR4Q13639 388 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 VEPH1Q14D04 833 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 TCERG1LQ5VWI1 586 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 KRT39Q6A163 491 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 FAM200AQ8TCP9 573 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 TAF4BQ92750 862 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 PSMG2Q969U7 264 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 TCEAL4Q96EI5 215 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 FUBP3Q96I24 572 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ZNF512Q96ME7 567 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 CEP63Q96MT8 703 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 DUSP9Q99956 384 aaKnown RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 KCNK12Q9HB15 430 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ABCB6Q9NP58 842 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 IGSF9Q9P2J2 1179 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ARMCX3Q9UH62 379 aaPredicted RBP13.79□□□□□ -0.2
COL5A1-206ENST00000465877 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 ASB3Q9Y575 518 aa13.79□□□□□ -0.2
COL5A1-206ENST00000465877 MIA3Q5JRA6 1907 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 NRG2O14511 850 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-206ENST00000465877 STX10O60499 249 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 ATP2C2O75185 946 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 MYL4P12829 197 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 STX17P56962 302 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-206ENST00000465877 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 FAM171BQ6P995 826 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 C4orf50Q6ZRC1 276 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 ITIH5Q86UX2 942 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 UBALD2Q8IYN6 164 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 OR6B3Q8NGW1 331 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 RSAD2Q8WXG1 361 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 EDAQ92838 391 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 FGF14Q92915 247 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 LRRC3Q9BY71 257 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 ZNF334Q9HCZ1 680 aaPredicted RBP13.78□□□□□ -0.2
COL5A1-206ENST00000465877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL5A1-206ENST00000465877 DUSP12Q9UNI6 340 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 NUMBLQ9Y6R0 609 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 ZNF318Q5VUA4 2279 aa13.78□□□□□ -0.2
COL5A1-206ENST00000465877 A8MXQ7 604 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 ZNF197O14709 1029 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 MOSPD3O75425 235 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 PDGFRBP09619 1106 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CYP2F1P24903 491 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 GNL1P36915 607 aaPredicted RBP13.77□□□□□ -0.21
COL5A1-206ENST00000465877 GPR15P49685 360 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CDH8P55286 799 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 COL4A3Q01955 1670 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 SIGLEC14Q08ET2 396 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 TDGQ13569 410 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 MAPRE1Q15691 268 aaKnown RBP13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CCDC40Q4G0X9 1142 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 TMEM31Q5JXX7 168 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
COL5A1-206ENST00000465877 MTSS1LQ765P7 747 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms