RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 GIPC2Q8TF65 315 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 EZH1Q92800 747 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-208ENST00000465721 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
CNOT4-208ENST00000465721 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
CNOT4-208ENST00000465721 KCND2Q9NZV8 630 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 ZMYM5Q9UJ78 669 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
CNOT4-208ENST00000465721 A0A0B4J269 797 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 H0YCG3 227 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 TADA3O75528 432 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 F11P03951 625 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 PLA2G4BP0C869 781 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 HAPLN1P10915 354 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 NLRP12P59046 1061 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 ATP2C1P98194 919 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 RNF43Q68DV7 783 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 SPPL2BQ8TCT7 592 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 REEP2Q9BRK0 252 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 KIF9Q9HAQ2 790 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 LARSQ9P2J5 1176 aaKnown RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 CPSF3Q9UKF6 684 aaKnown RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 TBX20Q9UMR3 447 aa12.73□□□□□ -0.37
CNOT4-208ENST00000465721 SMG1Q96Q15 3661 aaKnown RBP12.73□□□□□ -0.37
CNOT4-208ENST00000465721 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
CNOT4-208ENST00000465721 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 K7ENM7 598 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 DCLK1O15075 740 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 DRD1P21728 446 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
CNOT4-208ENST00000465721 GJA4P35212 333 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 AVPR1AP37288 418 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 BFSP1Q12934 665 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 TMEM132DQ14C87 1099 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 CD302Q8IX05 232 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 C2orf15Q8WU43 125 aaKnown RBP12.72□□□□□ -0.37
CNOT4-208ENST00000465721 PLIN2Q99541 437 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 MSTO1Q9BUK6 570 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
CNOT4-208ENST00000465721 TDP1Q9NUW8 608 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
CNOT4-208ENST00000465721 DSEQ9UL01 958 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 DERAQ9Y315 318 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 LOC400499M0QZD8 3231 aa12.72□□□□□ -0.37
CNOT4-208ENST00000465721 LNP1A1A4G5 178 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 CYB561D2O14569 222 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 GIPC1O14908 333 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 GPR15P49685 360 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 TAF6P49848 677 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 NOVA1P51513 510 aaKnown RBP12.71□□□□□ -0.37
CNOT4-208ENST00000465721 GALK1P51570 392 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 ZNF131P52739 623 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 USP4Q13107 963 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 ZNF268Q14587 947 aaPredicted RBP12.71□□□□□ -0.37
CNOT4-208ENST00000465721 KARSQ15046 597 aaKnown RBP12.71□□□□□ -0.37
CNOT4-208ENST00000465721 PDGFRLQ15198 375 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 ELF2Q15723 593 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 ZNF77Q15935 545 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 WSCD1Q658N2 575 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 TXNDC8Q6A555 127 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 SYT13Q7L8C5 426 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 FAM184AQ8NB25 1140 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 RPLP0P6Q8NHW5 317 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 FIZ1Q96SL8 496 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 P2RY13Q9BPV8 354 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
CNOT4-208ENST00000465721 TMLHEQ9NVH6 421 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 C2CD2Q9Y426 696 aa12.71□□□□□ -0.37
CNOT4-208ENST00000465721 SOBPA7XYQ1 873 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 TISP43B9A030 160 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 APBB3O95704 486 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 CAVIN2O95810 425 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 SCP2P22307 547 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ACOT2P49753 483 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 CREB5Q02930 508 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ZNF252P-AS1Q0IIN9 211 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 DMC1Q14565 340 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 MTF1Q14872 753 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 TAF12Q16514 161 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 FBXO43Q4G163 708 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 PMS2CLQ68D20 193 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 EFCAB13Q8IY85 973 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 CPA6Q8N4T0 437 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ACDQ96AP0 544 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ASB7Q9H672 318 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms