RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 BOP1Q14137 746 aaKnown RBP6.57□□□□□ -1.36
SMC4-205ENST00000465563 ICE2Q659A1 982 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 C11orf87Q6NUJ2 197 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 WDR53Q7Z5U6 358 aaPredicted RBP6.57□□□□□ -1.36
SMC4-205ENST00000465563 NEK8Q86SG6 692 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 C9orf106Q8NAJ2 232 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 FAM46DQ8NEK8 389 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 LMBRD1Q9NUN5 540 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 SPEF1Q9Y4P9 236 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 H0YIZ8 118 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 ZNF213O14771 459 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 SLC16A3O15427 465 aaKnown RBP6.56□□□□□ -1.36
SMC4-205ENST00000465563 FTLP02792 175 aaPredicted RBP6.56□□□□□ -1.36
SMC4-205ENST00000465563 CYP2C18P33260 490 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 PTGER1P34995 402 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 RECQLP46063 649 aaPredicted RBP6.56□□□□□ -1.36
SMC4-205ENST00000465563 TUBA4AP68366 448 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 AMPD3Q01432 767 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 PRAMEF17Q5VTA0 474 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 MORN5Q5VZ52 161 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 ZNF66Q6ZN08 573 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 PRR18Q8N4B5 295 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.56□□□□□ -1.36
SMC4-205ENST00000465563 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
SMC4-205ENST00000465563 FAM167AQ96KS9 214 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 SLC46A1Q96NT5 459 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 PUS7Q96PZ0 661 aaKnown RBP6.56□□□□□ -1.36
SMC4-205ENST00000465563 BHMT2Q9H2M3 363 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 DLL3Q9NYJ7 618 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 BTBD3Q9Y2F9 522 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 SBNO2Q9Y2G9 1366 aa6.56□□□□□ -1.36
SMC4-205ENST00000465563 SMIM22K7EJ46 135 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 TP73O15350 636 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 ONECUT2O95948 504 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 AHSGP02765 367 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
SMC4-205ENST00000465563 TYRP14679 529 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 CTGFP29279 349 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 MPGP29372 298 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 EEFSECP57772 596 aaKnown RBP6.55□□□□□ -1.36
SMC4-205ENST00000465563 MAPK7Q13164 816 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 LAYNQ6UX15 382 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 USP45Q70EL2 814 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 MAVSQ7Z434 540 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 YTHDF3Q7Z739 585 aaKnown RBP6.55□□□□□ -1.36
SMC4-205ENST00000465563 PPP1R3BQ86XI6 285 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 SH2B3Q9UQQ2 575 aa6.55□□□□□ -1.36
SMC4-205ENST00000465563 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 TISP43B9A030 160 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 PPP6CO00743 305 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 SNUPNO95149 360 aaKnown RBP6.54□□□□□ -1.36
SMC4-205ENST00000465563 IL6RP08887 468 aaPredicted RBP6.54□□□□□ -1.36
SMC4-205ENST00000465563 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
SMC4-205ENST00000465563 CYP2D6P10635 497 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 LIPAP38571 399 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 MAP2K6P52564 334 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 ZNF134P52741 427 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 EVA1CP58658 441 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 KLF9Q13886 244 aaPredicted RBP6.54□□□□□ -1.36
SMC4-205ENST00000465563 LONRF3Q496Y0 759 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 PCID2Q5JVF3 399 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 TREML2Q5T2D2 321 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 FCRL4Q96PJ5 515 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 SMAD5Q99717 465 aaKnown RBP6.54□□□□□ -1.36
SMC4-205ENST00000465563 TTYH3Q9C0H2 523 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 PCDHA1Q9Y5I3 950 aa6.54□□□□□ -1.36
SMC4-205ENST00000465563 ATXN1LP0C7T5 689 aaKnown RBP6.53□□□□□ -1.36
SMC4-205ENST00000465563 ETFDHQ16134 617 aa6.53□□□□□ -1.36
SMC4-205ENST00000465563 SLC18B1Q6NT16 456 aa6.53□□□□□ -1.36
SMC4-205ENST00000465563 PNPOQ9NVS9 261 aa6.53□□□□□ -1.36
SMC4-205ENST00000465563 SERTAD3Q9UJW9 196 aa6.53□□□□□ -1.36
SMC4-205ENST00000465563 PRRT4C9JH25 899 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 DCLK1O15075 740 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 BMP15O95972 392 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 TUBB4AP04350 444 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 CLCN2P51788 898 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 LOXL3P58215 753 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
SMC4-205ENST00000465563 AMOTQ4VCS5 1084 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 CEP78Q5JTW2 689 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 SLC9A4Q6AI14 798 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 BRIX1Q8TDN6 353 aaKnown RBP6.52□□□□□ -1.37
SMC4-205ENST00000465563 DENND1AQ8TEH3 1009 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 SH2D3AQ9BRG2 576 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 PTDSS2Q9BVG9 487 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 QTRT1Q9BXR0 403 aaKnown RBP6.52□□□□□ -1.37
SMC4-205ENST00000465563 DUSP22Q9NRW4 184 aa6.52□□□□□ -1.37
SMC4-205ENST00000465563 H3BUI4 141 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 MYO1FO00160 1098 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 POU2F2P09086 479 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 ENGP17813 658 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
SMC4-205ENST00000465563 PXNP49023 591 aaPredicted RBP6.51□□□□□ -1.37
SMC4-205ENST00000465563 PDE1AP54750 535 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 IQCB1Q15051 598 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 PGS1Q32NB8 556 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 SUPT20HL1Q3ZLR7 823 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 CCDC157Q569K6 752 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms