RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM161BQ8NDZ6 487 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 FEZF2Q8TBJ5 459 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 CCDC110Q8TBZ0 833 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 DCAKDQ8WVC6 231 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 OXNAD1Q96HP4 312 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 APOPT1Q96IL0 206 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 C11orf70Q9BRQ4 267 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 GPAMQ9HCL2 828 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 ARHGEF4Q9NR80 690 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SNCAIPQ9Y6H5 919 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 NRXN2Q9P2S2 1712 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 KLRG2A4D1S0 409 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 FCHO1O14526 889 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PPEF1O14829 653 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 RIMBP2O15034 1052 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 TLR3O15455 904 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 FAM155BO75949 473 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 GDF11O95390 407 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 LYNP07948 512 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ETS1P14921 441 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PGM1P36871 562 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ETV4P43268 484 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 POLE2P56282 527 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PEX3P56589 373 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 UBXN2AP68543 259 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SLC18A2Q05940 514 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 LAMB3Q13751 1172 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 THOC5Q13769 683 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 TFDP1Q14186 410 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 EFTUD2Q15029 972 aaKnown RBP eCLIP7.66□□□□□ -1.189e-7■■■■□ 20.8
USP48-206ENST00000464577 CIAPIN1Q6FI81 312 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 LLGL2Q6P1M3 1020 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 MFSD7Q6UXD7 560 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PHLDB2Q86SQ0 1253 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ADGRG6Q86SQ4 1221 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 MYLK4Q86YV6 388 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 TMPRSS6Q8IU80 811 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PPIL6Q8IXY8 311 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SCYL3Q8IZE3 742 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ABRAQ8N0Z2 381 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SLC35B2Q8TB61 432 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PYROXD1Q8WU10 500 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SPIRE2Q8WWL2 714 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SENP7Q9BQF6 1050 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ASCC2Q9H1I8 757 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 PARVAQ9NVD7 372 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 DDX56Q9NY93 547 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 SLC17A7Q9P2U7 560 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 KCNG1Q9UIX4 513 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 STRIP2Q9ULQ0 834 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 USTQ9Y2C2 406 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 hCG_1818297A0A087WSY0 165 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 IQANK1A0A1B0GTG1 560 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 WDR91A4D1P6 747 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 DHX15O43143 795 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 PLA2G6O60733 806 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 CIB2O75838 187 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 CALCAP01258 141 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 MT-ND3P03897 115 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SERPINB2P05120 415 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PIM1P11309 404 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 KRT10P13645 584 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ANPEPP15144 967 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ITGB5P18084 799 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ACO1P21399 889 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 GARTP22102 1010 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 CRABP2P29373 138 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 YWHABP31946 246 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 GJC1P36383 396 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 SSR1P43307 286 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 SERPINB4P48594 390 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 NOP14P78316 857 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 CLDN10P78369 228 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 DSG1Q02413 1049 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 TBCCQ15814 346 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 DNAL1Q4LDG9 190 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 LCE2DQ5TA82 110 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 C6orf163Q5TEZ5 329 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PTF1AQ7RTS3 328 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ARHGAP22Q7Z5H3 698 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 LRRC6Q86X45 466 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ANKMY2Q8IV38 441 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 C4orf19Q8IY42 314 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 GPD1LQ8N335 351 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 NAT8LQ8N9F0 302 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 DTX3LQ8TDB6 740 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PRR11Q96HE9 360 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 OLFM3Q96PB7 478 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PPP1R12CQ9BZL4 782 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 ZC3H12CQ9C0D7 883 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 VCX3BQ9H321 246 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 VCX3AQ9NNX9 186 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 FBXO6Q9NRD1 293 aaPredicted RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 METTL5Q9NRN9 209 aaKnown RBP7.66□□□□□ -1.18
USP48-206ENST00000464577 ANKEF1Q9NU02 776 aa7.66□□□□□ -1.18
USP48-206ENST00000464577 PCMTD2Q9NV79 361 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms