RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 CUL9Q8IWT3 2517 aa18.83■□□□□ 0.61
UFM1-204ENST00000464423 HAPLN1P10915 354 aaPredicted RBP18.83■□□□□ 0.6
UFM1-204ENST00000464423 CYP2F1P24903 491 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 ALDH1A3P47895 512 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 NLRP12P59046 1061 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 NOP14P78316 857 aaKnown RBP18.83■□□□□ 0.6
UFM1-204ENST00000464423 ORC1Q13415 861 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 FAM171BQ6P995 826 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 FRMD5Q7Z6J6 570 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 ZDHHC14Q8IZN3 488 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 SPPL2BQ8TCT7 592 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 GIPC2Q8TF65 315 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 TAF4BQ92750 862 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 MYLPFQ96A32 169 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 ACSF2Q96CM8 615 aaPredicted RBP18.83■□□□□ 0.6
UFM1-204ENST00000464423 ZNF512Q96ME7 567 aaPredicted RBP18.83■□□□□ 0.6
UFM1-204ENST00000464423 SMOC2Q9H3U7 446 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 HMGXB4Q9UGU5 601 aa18.83■□□□□ 0.6
UFM1-204ENST00000464423 A8MXQ7 604 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 GJA1P17302 382 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 CEBPBP17676 345 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 EPHB3P54753 998 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 MDH1BQ5I0G3 518 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 PRSS36Q5K4E3 855 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 FBXL13Q8NEE6 735 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 C2orf15Q8WU43 125 aaKnown RBP18.82■□□□□ 0.6
UFM1-204ENST00000464423 RSAD2Q8WXG1 361 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 FGF13Q92913 245 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 LRRC3Q9BY71 257 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 METTL14Q9HCE5 456 aaKnown RBP18.82■□□□□ 0.6
UFM1-204ENST00000464423 ZNF334Q9HCZ1 680 aaPredicted RBP18.82■□□□□ 0.6
UFM1-204ENST00000464423 RAB20Q9NX57 234 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 MRPS23Q9Y3D9 190 aaKnown RBP18.82■□□□□ 0.6
UFM1-204ENST00000464423 DOCK6Q96HP0 2047 aa18.82■□□□□ 0.6
UFM1-204ENST00000464423 STX10O60499 249 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 MOSPD3O75425 235 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 FAM163BP0C2L3 166 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 MYL4P12829 197 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 PTPN1P18031 435 aaKnown RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 TUFMP49411 452 aaKnown RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 CYP27A1Q02318 531 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 SMARCB1Q12824 385 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 NFE2Q16621 373 aaPredicted RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 DDR2Q16832 855 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 IQCEQ6IPM2 695 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 RBM43Q6ZSC3 357 aaKnown RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 DNAJB7Q7Z6W7 309 aaPredicted RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 TMC8Q8IU68 726 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 SPATA2LQ8IUW3 424 aaPredicted RBP18.81■□□□□ 0.6
UFM1-204ENST00000464423 ELMOD1Q8N336 334 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 TATDN2Q93075 761 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 PCED1BQ96HM7 432 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 EPS15L1Q9UBC2 864 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 HSFX1Q9UBD0 423 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 CDH7Q9ULB5 785 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 NOTCH4Q99466 2003 aa18.81■□□□□ 0.6
UFM1-204ENST00000464423 PI4K2BG5E9Z4 385 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 CLDN5O00501 218 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 LAMP2P13473 410 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 FMO5P49326 533 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 NDST1P52848 882 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 PLD1Q13393 1074 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 MTMR3Q13615 1198 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
UFM1-204ENST00000464423 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 TRIM59Q8IWR1 403 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 NPAS3Q8IXF0 933 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 PLCD3Q8N3E9 789 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 B3GALNT2Q8NCR0 500 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 MYCBPAPQ8TBZ2 947 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 MCRS1Q96EZ8 462 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 ARID3AQ99856 593 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 BCO2Q9BYV7 579 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 IMPG2Q9BZV3 1241 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 NIF3L1Q9GZT8 377 aa18.8■□□□□ 0.6
UFM1-204ENST00000464423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.8■□□□□ 0.6
UFM1-204ENST00000464423 DCXO43602 365 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 MBD3O95983 291 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 P4HA1P13674 534 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 CD58P19256 250 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 BDNFP23560 247 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 CACNA2D1P54289 1103 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 EPHA5P54756 1037 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 PTPN21Q16825 1174 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 CFAP221Q4G0U5 840 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 CYP4A22Q5TCH4 519 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 ACOT1Q86TX2 421 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 SCN4BQ8IWT1 228 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 PSMG2Q969U7 264 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 TWNKQ96RR1 684 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 B3GNT5Q9BYG0 378 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 KCNK12Q9HB15 430 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 ABCB6Q9NP58 842 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 AVENQ9NQS1 362 aaPredicted RBP18.79■□□□□ 0.6
UFM1-204ENST00000464423 ASAH2Q9NR71 780 aa18.79■□□□□ 0.6
UFM1-204ENST00000464423 TMEM30AQ9NV96 361 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms