RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 NCOR2Q9Y618 2525 aa15.61■□□□□ 0.09
ALMS1-202ENST00000464408 PRPF40AO75400 957 aaKnown RBP15.6■□□□□ 0.09
ALMS1-202ENST00000464408 TADA3O75528 432 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 FGF19O95750 216 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 KRT19P08727 400 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 CYP2F1P24903 491 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 CDC25CP30307 473 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 PNPLA4P41247 253 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 NLRP12P59046 1061 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 TSPY1Q01534 308 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 PON2Q15165 354 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 TAF12Q16514 161 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 LPAL2Q16609 132 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 DDR2Q16832 855 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 ARHGAP29Q52LW3 1261 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 TRIM68Q6AZZ1 485 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 CBWD2Q8IUF1 395 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 DCP1BQ8IZD4 617 aaKnown RBP15.6■□□□□ 0.09
ALMS1-202ENST00000464408 CMTM8Q8IZV2 173 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 GPD1LQ8N335 351 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 MAB21L3Q8N8X9 362 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 BPIFB1Q8TDL5 484 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 ZSCAN16Q9H4T2 348 aaPredicted RBP15.6■□□□□ 0.09
ALMS1-202ENST00000464408 OBP2AQ9NY56 170 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 NCDNQ9UBB6 729 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 ITGA11Q9UKX5 1188 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 MAGED2Q9UNF1 606 aaPredicted RBP15.6■□□□□ 0.09
ALMS1-202ENST00000464408 SNX9Q9Y5X1 595 aa15.6■□□□□ 0.09
ALMS1-202ENST00000464408 SDK1Q7Z5N4 2213 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 OTOL1A6NHN0 477 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 SPTLC2O15270 562 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 HUS1O60921 280 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 LDHAP00338 332 aaKnown RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 F11P03951 625 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 CASP1P29466 404 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 WEE1P30291 646 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 MLLT6P55198 1093 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 SMARCB1Q12824 385 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 SRSF5Q13243 272 aaKnown RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 ALCAMQ13740 583 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 SOWAHAQ2M3V2 549 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 FOXD4L6Q3SYB3 417 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 INTS6LQ5JSJ4 861 aaKnown RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 TXNDC8Q6A555 127 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 SHC4Q6S5L8 630 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 FOXD4L3Q6VB84 417 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 MAMSTRQ6ZN01 415 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 CCDC65Q8IXS2 484 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 LRRC52Q8N7C0 313 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 CACTINQ8WUQ7 758 aaKnown RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 USP13Q92995 863 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 DHX58Q96C10 678 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 CHFRQ96EP1 664 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 C8orf33Q9H7E9 229 aaPredicted RBP15.59■□□□□ 0.09
ALMS1-202ENST00000464408 KBTBD4Q9NVX7 518 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 GTF3C4Q9UKN8 822 aa15.59■□□□□ 0.09
ALMS1-202ENST00000464408 ATP2C2O75185 946 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 TMEM191BP0C7N4 346 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 CCR3P51677 355 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 ERMP1Q7Z2K6 904 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 RALGPS2Q86X27 583 aaPredicted RBP15.58■□□□□ 0.08
ALMS1-202ENST00000464408 ADGRF2Q8IZF7 708 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 CELF5Q8N6W0 485 aaKnown RBP15.58■□□□□ 0.08
ALMS1-202ENST00000464408 ACBD6Q9BR61 282 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 TRIM9Q9C026 710 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 TNMDQ9H2S6 317 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 TMEM206Q9H813 350 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 HPS4Q9NQG7 708 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 INTS13Q9NVM9 706 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 GDAP2Q9NXN4 497 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 HELZP42694 1942 aaKnown RBP15.58■□□□□ 0.08
ALMS1-202ENST00000464408 RALGAPA1Q6GYQ0 2036 aa15.58■□□□□ 0.08
ALMS1-202ENST00000464408 MYO16Q9Y6X6 1858 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 MED19A0JLT2 244 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 CHURC1-FNTBB4DL54 471 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 K7ESF4 209 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 GABRDO14764 452 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 ARSAP15289 507 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 TGM1P22735 817 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 LMO2P25791 158 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 CXCL12P48061 93 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 FNTBP49356 437 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 PSMC1P62191 440 aaKnown RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 ASIC1P78348 528 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 RBP5P82980 135 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 CCINQ13939 588 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 LRRC32Q14392 662 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 NFE2Q16621 373 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 RSPO4Q2I0M5 234 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 NAIF1Q69YI7 327 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 HEATR6Q6AI08 1181 aaKnown RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 PKN3Q6P5Z2 889 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 EPM2AIP1Q7L775 607 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 SPEM1Q8N4L4 309 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 LEO1Q8WVC0 666 aaPredicted RBP15.57■□□□□ 0.08
ALMS1-202ENST00000464408 KBTBD7Q8WVZ9 684 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 MSANTD3Q96H12 275 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 SLC22A12Q96S37 553 aa15.57■□□□□ 0.08
ALMS1-202ENST00000464408 FAM83CQ9BQN1 747 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms