RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 POLE2P56282 527 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 GEMIN4P57678 1058 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 DSG1Q02413 1049 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RASA3Q14644 834 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RCN1Q15293 331 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 SIX1Q15475 284 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 EPC2Q52LR7 807 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 TAF1BQ53T94 588 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 PRR16Q569H4 304 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ODR4Q5SWX8 454 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 THEMIS2Q5TEJ8 643 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RASIP1Q5U651 963 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 FAM47EQ6ZV65 393 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CLNKQ7Z7G1 428 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ADGRG6Q86SQ4 1221 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ZC3H18Q86VM9 953 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CHSY1Q86X52 802 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 TMPRSS6Q8IU80 811 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 KATNAL2Q8IYT4 538 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RCOR2Q8IZ40 523 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ATP11CQ8NB49 1132 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 XXYLT1Q8NBI6 393 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 SLC44A5Q8NCS7 719 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RAB3IL1Q8TBN0 382 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 DENND1AQ8TEH3 1009 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 C10orf82Q8WW14 230 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 PSPC1Q8WXF1 523 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 JADE3Q92613 823 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 CELF1Q92879 486 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 FAM136AQ96C01 138 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 RBM15Q96T37 977 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 FGFBP2Q9BYJ0 223 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 FRMD8Q9BZ67 464 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 PPP1R12CQ9BZL4 782 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 GPR88Q9GZN0 384 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 DENND2DQ9H6A0 471 aaPredicted RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 KANSL2Q9H9L4 492 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 LRRC4BQ9NT99 713 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 NDE1Q9NXR1 346 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 EURLQ9NYK6 297 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 ATXN10Q9UBB4 475 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 BCAP29Q9UHQ4 241 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 IKBKGQ9Y6K9 419 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 MYH11P35749 1972 aa7.57□□□□□ -1.2
CLSTN1-204ENST00000464286 NFASCO94856 1347 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 A8MUI8 341 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 DNALI1O14645 258 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 CAPN9O14815 690 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 KLF11O14901 512 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ALOX15BO15296 676 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 CLDN3O15551 220 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 BNIP3LO60238 219 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SPAG7O75391 227 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 PROSCO94903 275 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SPATA31C1P0DKV0 1188 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 PLS3P13797 630 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 IL1R1P14778 569 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 FOXN2P32314 431 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 HSPA1LP34931 641 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 PTPN7P35236 360 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 COPB2P35606 906 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 PRELPP51888 382 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ARL4CP56559 192 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 GTF2IP78347 998 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 CDK16Q00536 496 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 TAP1Q03518 808 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 DEUP1Q05D60 604 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SPIRE1Q08AE8 756 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 DNAJC3Q13217 504 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 PPP2R5CQ13362 524 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 GRAPQ13588 217 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ATG16L1Q676U5 607 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 OR52E8Q6IFG1 317 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ZNF449Q6P9G9 518 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 GJB7Q6PEY0 223 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 C1orf186Q6ZWK4 172 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 B4GALNT2Q8NHY0 566 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 GRAPLQ8TC17 118 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 CRYGNQ8WXF5 182 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SHC3Q92529 594 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 NCSTNQ92542 709 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ZNF75CPQ92670 426 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 MKL1Q969V6 931 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 UTP4Q969X6 686 aaKnown RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 SLC7A6OSQ96CW6 309 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 MTFR1LQ9H019 292 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 IQCGQ9H095 443 aaKnown RBP7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 WWP1Q9H0M0 922 aa7.56□□□□□ -1.2
CLSTN1-204ENST00000464286 ST6GALNAC4Q9H4F1 302 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms