RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CYTH4Q9UIA0 394 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 UBQLN1Q9UMX0 589 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 HES2Q9Y543 173 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 SSR1P43307 286 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 DAB2IPQ5VWQ8 1189 aa22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 ZBTB9Q96C00 473 aa22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 NT5C1AQ9BXI3 368 aa22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 UPF3AQ9H1J1 476 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 RASSF4Q9H2L5 321 aa22.97■■□□□ 1.27
PDLIM2-216ENST00000464275 SIGLEC16A6NMB1 481 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 ALDH1A1P00352 501 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 ZNF252P-AS1Q0IIN9 211 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 GNASQ5JWF2 1037 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 UBXN11Q5T124 520 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 NIPA2Q8N8Q9 360 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 TRIB2Q92519 343 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 TUBGCP4Q9UGJ1 667 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 FEZ2Q9UHY8 353 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 GABRQQ9UN88 632 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 HMGB1P1B2RPK0 211 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 O00370 1275 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 CETN2P41208 172 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 ZNF268Q14587 947 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 STILQ15468 1287 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 TTMPQ5BVD1 217 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 LRRC38Q5VT99 294 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 KDM7AQ6ZMT4 941 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 CCDC50Q8IVM0 306 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 CCDC105Q8IYK2 499 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 APOL6Q9BWW8 343 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 ARHGAP39Q9C0H5 1083 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 SPC25Q9HBM1 224 aa22.96■■□□□ 1.27
PDLIM2-216ENST00000464275 SRRM3A6NNA2 597 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 M0QYV0 167 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 XPOTO43592 962 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 ATF7P17544 494 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 GBP1P32455 592 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 GABRB2P47870 512 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 PSMC1P62191 440 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 OGDHQ02218 1023 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 MTMR3Q13615 1198 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 XKR4Q5GH76 650 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 CPXM1Q96SM3 734 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 TRIM31Q9BZY9 425 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 SYNCQ9H7C4 482 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 RSPH14Q9UHP6 348 aa22.95■■□□□ 1.26
PDLIM2-216ENST00000464275 CD4P01730 458 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 AKAP5P24588 427 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 GPD2P43304 727 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 C9orf57Q5W0N0 161 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 LCLAT1Q6UWP7 414 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 XYLT1Q86Y38 959 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 SLCO2A1Q92959 643 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 C18orf25Q96B23 403 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 RBM41Q96IZ5 413 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 SNX9Q9Y5X1 595 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 GOLGA8SH3BPF8 625 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 PPEF2O14830 753 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 KRT3P12035 628 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 KCNE1P15382 129 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 FLT3LGP49771 235 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 NKX3-2P78367 333 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 GLRA4Q5JXX5 417 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 RCOR2Q8IZ40 523 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 FNIP1Q8TF40 1166 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 ARL8AQ96BM9 186 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 HOMER3Q9NSC5 361 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 PARP2Q9UGN5 583 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 GTF2IRD1Q9UHL9 959 aa22.94■■□□□ 1.26
PDLIM2-216ENST00000464275 TMEM88BA6NKF7 163 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 M0QZ92 97 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 GJC1P36383 396 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 GNGT1P63211 74 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 MRPS6P82932 125 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 OSBPL8Q9BZF1 889 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 TJP2Q9UDY2 1190 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 GRIN2DO15399 1336 aa22.93■■□□□ 1.26
PDLIM2-216ENST00000464275 SMIM28A0A1B0GU29 152 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 GOLGA6L10A6NI86 522 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 F8VP50 259 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 SEPT4O43236 478 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ERBB2P04626 1255 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 RALAP11233 206 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 CORO7P57737 925 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 KLF1Q13351 362 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 PDCLQ13371 301 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 NBPF20Q3BBV1 942 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 SPDYCQ5MJ68 293 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 SPATS2Q86XZ4 545 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 C1orf54Q8WWF1 131 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 PIK3R5Q8WYR1 880 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 MCRS1Q96EZ8 462 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 MRPL45Q9BRJ2 306 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 HERPUD2Q9BSE4 406 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 DCLK3Q9C098 648 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 MIS12Q9H081 205 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 ZDHHC18Q9NUE0 388 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 DDX56Q9NY93 547 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 SNX24Q9Y343 169 aa22.92■■□□□ 1.26
PDLIM2-216ENST00000464275 IPPQ9Y573 584 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms