RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NUP210Q8TEM1 1887 aaPredicted RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 SCNM1Q9BWG6 230 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 ECT2Q9H8V3 914 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 DUS2Q9NX74 493 aaKnown RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 KCND2Q9NZV8 630 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 MAGED2Q9UNF1 606 aaPredicted RBP15.64■□□□□ 0.09
SMC1A-204ENST00000463684 PCDHB5Q9Y5E4 795 aa15.64■□□□□ 0.09
SMC1A-204ENST00000463684 SDK1Q7Z5N4 2213 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 CEP295Q9C0D2 2601 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 ANO9A1A5B4 782 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 CSH1P0DML2 217 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 CSH2P0DML3 217 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 HOXB3P14651 431 aaPredicted RBP15.63■□□□□ 0.09
SMC1A-204ENST00000463684 HMGA1P17096 107 aaKnown RBP15.63■□□□□ 0.09
SMC1A-204ENST00000463684 PRPHP41219 470 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 IFNAR2P48551 515 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 NCKAP1LP55160 1127 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 TMEM132DQ14C87 1099 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 UAP1L1Q3KQV9 507 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 PMS2CLQ68D20 193 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 LRRTM3Q86VH5 581 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 KCTD17Q8N5Z5 321 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 FAM184AQ8NB25 1140 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 ATP2A3Q93084 1043 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 PYM1Q9BRP8 204 aaKnown RBP15.63■□□□□ 0.09
SMC1A-204ENST00000463684 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
SMC1A-204ENST00000463684 MSTO1Q9BUK6 570 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 UXTQ9UBK9 157 aaPredicted RBP15.63■□□□□ 0.09
SMC1A-204ENST00000463684 DERAQ9Y315 318 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
SMC1A-204ENST00000463684 SRRM3A6NNA2 597 aaPredicted RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 CDX4O14627 284 aaPredicted RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 FAM189A1O60320 539 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 PRPF40AO75400 957 aaKnown RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 TOP3BO95985 862 aaKnown RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 SCP2P22307 547 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 TAF6P49848 677 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 IRX4P78413 519 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 MTF1Q14872 753 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 NAIF1Q69YI7 327 aaPredicted RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 CCDC83Q8IWF9 413 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 OSCP1Q8WVF1 389 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 GATA6Q92908 595 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 CDK5RAP3Q96JB5 506 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 PLIN2Q99541 437 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 LLPHQ9BRT6 129 aaKnown RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 TMEM121BQ9BXQ6 578 aaPredicted RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 TPSD1Q9BZJ3 242 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 SLC32A1Q9H598 525 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 CPSF3Q9UKF6 684 aaKnown RBP15.62■□□□□ 0.09
SMC1A-204ENST00000463684 ASPMQ8IZT6 3477 aa15.62■□□□□ 0.09
SMC1A-204ENST00000463684 SPEGQ15772 3267 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 BAHCC1Q9P281 2608 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 A0A0B4J269 797 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 NPHP3-ACAD11A0A0J9YXS1 232 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 NFICP08651 508 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 USP17L7P0C7H9 530 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 PLA2G4BP0C869 781 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 DHPSP49366 369 aaPredicted RBP15.61■□□□□ 0.09
SMC1A-204ENST00000463684 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
SMC1A-204ENST00000463684 SLC12A3P55017 1021 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 TSPY1Q01534 308 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 FAM160A1Q05DH4 1040 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 ST3GAL1Q11201 340 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 LMAN2Q12907 356 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 IL17AQ16552 155 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 WSCD1Q658N2 575 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 LRSAM1Q6UWE0 723 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 DEFB124Q8NES8 71 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 RIN3Q8TB24 985 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 ZCCHC14Q8WYQ9 949 aaKnown RBP15.61■□□□□ 0.09
SMC1A-204ENST00000463684 PIGKQ92643 395 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 PI4K2AQ9BTU6 479 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 ASB7Q9H672 318 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 TRPC7Q9HCX4 862 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 DPP3Q9NY33 737 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 ZZEF1O43149 2961 aa15.61■□□□□ 0.09
SMC1A-204ENST00000463684 FAM208BQ5VWN6 2430 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 TRAV19A0A0A6YYK7 116 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 PATE3B3GLJ2 98 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 PIGRP01833 764 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 RPL10AP62906 217 aaKnown RBP15.6■□□□□ 0.09
SMC1A-204ENST00000463684 HMGN5P82970 282 aaKnown RBP15.6■□□□□ 0.09
SMC1A-204ENST00000463684 NFE2Q16621 373 aaPredicted RBP15.6■□□□□ 0.09
SMC1A-204ENST00000463684 HYIQ5T013 277 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 ANO7Q6IWH7 933 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 MYCT1Q8N699 235 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 EZH1Q92800 747 aaPredicted RBP15.6■□□□□ 0.09
SMC1A-204ENST00000463684 KCNN1Q92952 543 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 CYP2S1Q96SQ9 504 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 NUSAP1Q9BXS6 441 aaKnown RBP15.6■□□□□ 0.09
SMC1A-204ENST00000463684 TMEM206Q9H813 350 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 ODF2LQ9ULJ1 636 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 LIMCH1Q9UPQ0 1083 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 C2CD2Q9Y426 696 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 WNT6Q9Y6F9 365 aa15.6■□□□□ 0.09
SMC1A-204ENST00000463684 ATRXP46100 2492 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 KIF26AQ9ULI4 1882 aaPredicted RBP15.59■□□□□ 0.09
SMC1A-204ENST00000463684 KPNA7A9QM74 516 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 K7ENM7 598 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms