RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PQBP1O60828 265 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 HIP1RO75146 1068 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ACO1P21399 889 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 COMTP21964 271 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ADORA2AP29274 412 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TFF2Q03403 129 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 PPIGQ13427 754 aaKnown RBP eCLIP4.23□□□□□ -1.737e-8■■□□□ 12.4
SCFD1-204ENST00000463622 UBE3CQ15386 1083 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 RAB30Q15771 203 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 FAM47AQ5JRC9 791 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TRIM68Q6AZZ1 485 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 GRAMD4Q6IC98 578 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 NAA16Q6N069 864 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 Q6ZSN1 163 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 STOX1Q6ZVD7 989 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 USP30Q70CQ3 517 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 RNF180Q86T96 592 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 CFHR4Q92496 578 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 SCYL1Q96KG9 808 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 STRBPQ96SI9 672 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MSRAQ9UJ68 235 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TNPO3Q9Y5L0 923 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MUC6Q6W4X9 2439 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 CCDC163A0A0D9SF12 145 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 GSG1L2A8MUP6 293 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 PLD2O14939 933 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 IGSF3O75054 1194 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 PGK1P00558 417 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 GH2P01242 217 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 HSPD1P10809 573 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 RARBP10826 455 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 VCAM1P19320 739 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TACR2P21452 398 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MEOX1P50221 254 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 KIF11P52732 1056 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 USP14P54578 494 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ADAM15Q13444 863 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 COG2Q14746 738 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 PRKD1Q15139 912 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 C21orf62-AS1Q17RA5 79 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 HS1BP3Q53T59 392 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM200BQ69YZ2 307 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 CCDC174Q6PII3 467 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TBC1D10CQ8IV04 446 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TEX11Q8IYF3 940 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 BCL6BQ8N143 479 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ACER1Q8TDN7 264 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 EXTL1Q92935 676 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 FOXRED1Q96CU9 486 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MAML3Q96JK9 1138 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 BOCQ9BWV1 1114 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 SPATC1LQ9H0A9 340 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 MROH8Q9H579 483 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ZSWIM4Q9H7M6 989 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 XPNPEP3Q9NQH7 507 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 DIAPH3Q9NSV4 1193 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 SLC5A4Q9NY91 659 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 PUF60Q9UHX1 559 aaKnown RBP4.23□□□□□ -1.73
SCFD1-204ENST00000463622 FBXO10Q9UK96 956 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 COG5Q9UP83 839 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ASB1Q9Y576 335 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 HS3ST3A1Q9Y663 406 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 ELP1O95163 1332 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 CCDC171Q6TFL3 1326 aa4.23□□□□□ -1.73
SCFD1-204ENST00000463622 SIPA1L1O43166 1804 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 CDK5RAP2Q96SN8 1893 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 PHIPQ8WWQ0 1821 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 RAD50Q92878 1312 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 OPA1O60313 960 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 DTNBO60941 627 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 DNAJC8O75937 253 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 BAG3O95817 575 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 CPA1P15085 419 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 CSF2RAP15509 400 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 SDHAP31040 664 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 GUCY1A2P33402 732 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 MECP2P51608 486 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ACLYP53396 1101 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 HAND2P61296 217 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 DUSP8Q13202 625 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 TTF1Q15361 905 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ADCK5Q3MIX3 580 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 NRN1LQ496H8 165 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 MCMDC2Q4G0Z9 681 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 USP39Q53GS9 565 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 WDR78Q5VTH9 848 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ZCCHC8Q6NZY4 707 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 CRIP3Q6Q6R5 217 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 RTN4RL1Q86UN2 441 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 MAPKAPK5Q8IW41 473 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 GPR135Q8IZ08 494 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 ZNF808Q8N4W9 903 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 TMEM199Q8N511 208 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 TGFBRAP1Q8WUH2 860 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 NUP133Q8WUM0 1156 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 SREK1Q8WXA9 508 aaKnown RBP4.22□□□□□ -1.73
SCFD1-204ENST00000463622 SLC28A3Q9HAS3 691 aa4.22□□□□□ -1.73
SCFD1-204ENST00000463622 IL23AQ9NPF7 189 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms