RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 FAM84AQ96KN4 292 aa22.07■■□□□ 1.12
PDLIM4-205ENST00000463615 ABI2Q9NYB9 513 aaPredicted RBP22.07■■□□□ 1.12
PDLIM4-205ENST00000463615 SNX9Q9Y5X1 595 aa22.07■■□□□ 1.12
PDLIM4-205ENST00000463615 VPS13AQ96RL7 3174 aa22.07■■□□□ 1.12
PDLIM4-205ENST00000463615 TNNC2P02585 160 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 KRT19P08727 400 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 PCSK1P29120 753 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 DNM1Q05193 864 aaKnown RBP22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 SNRNP35Q16560 246 aaKnown RBP22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 TMEM150AQ86TG1 271 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 OSTM1Q86WC4 334 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 TMEM174Q8WUU8 243 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 FUBP3Q96I24 572 aaKnown RBP eCLIP22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 LRRC3BQ96PB8 259 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 SPATA6Q9NWH7 488 aaPredicted RBP22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 PIAS3Q9Y6X2 628 aa22.06■■□□□ 1.12
PDLIM4-205ENST00000463615 LAMTOR5O43504 91 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 PRPF40AO75400 957 aaKnown RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 F11P03951 625 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 FAM163BP0C2L3 166 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 SLFN14P0C7P3 912 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 CSH1P0DML2 217 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 CSH2P0DML3 217 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 DDX6P26196 483 aaKnown RBP eCLIP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 PSMD6Q15008 389 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 FOXD4L6Q3SYB3 417 aaPredicted RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 ARHGAP29Q52LW3 1261 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 LMBRD2Q68DH5 695 aaPredicted RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 FAM171BQ6P995 826 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 FOXD4L3Q6VB84 417 aaPredicted RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 HS2ST1Q7LGA3 356 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 YAF2Q8IY57 180 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 ADGRF2Q8IZF7 708 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 XXYLT1Q8NBI6 393 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 NOC3LQ8WTT2 800 aaKnown RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 FAM3CQ92520 227 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 HPDLQ96IR7 371 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 MYRFLQ96LU7 910 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 GCNAQ96QF7 691 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 CHRDQ9H2X0 955 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 C8orf33Q9H7E9 229 aaPredicted RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 PRMT8Q9NR22 394 aaPredicted RBP22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 TICRRQ7Z2Z1 1910 aa22.05■■□□□ 1.12
PDLIM4-205ENST00000463615 LMNAP02545 664 aaKnown RBP22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 NLRP12P59046 1061 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 RPL10AP62906 217 aaKnown RBP22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 PLCB2Q00722 1185 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 CUL4BQ13620 913 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 TAF12Q16514 161 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 TRAPPC11Q7Z392 1133 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 GIPC2Q8TF65 315 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 KBTBD7Q8WVZ9 684 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 TRMT2BQ96GJ1 504 aaKnown RBP22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 PI4K2AQ9BTU6 479 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 SLC46A2Q9BY10 475 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 BLZF1Q9H2G9 400 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 R3HCC1Q9Y3T6 440 aaKnown RBP22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 R4GN57 208 aa22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 EP300Q09472 2414 aaPredicted RBP22.04■■□□□ 1.12
PDLIM4-205ENST00000463615 DPYSL4O14531 572 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 ACTN4O43707 911 aaKnown RBP22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 NOL4O94818 638 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 PRAMEF12O95522 483 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 WARSP23381 471 aaKnown RBP22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CASP1P29466 404 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 MAGEA11P43364 429 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CYP4F8P98187 520 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CYP24A1Q07973 514 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 KNOP1Q1ED39 458 aaKnown RBP22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CMTM8Q8IZV2 173 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 ADSSL1Q8N142 457 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 ZBTB44Q8NCP5 570 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 BPIFB1Q8TDL5 484 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CSGALNACT1Q8TDX6 532 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CEP295NLQ96MC4 621 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 CGRRF1Q99675 332 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 GZF1Q9H116 711 aaPredicted RBP22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 UXTQ9UBK9 157 aaPredicted RBP22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 USP25Q9UHP3 1055 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 GTF3C4Q9UKN8 822 aa22.03■■□□□ 1.12
PDLIM4-205ENST00000463615 OTOGLQ3ZCN5 2332 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 DENND4CQ5VZ89 1909 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 CFAP54Q96N23 3096 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 MYBPHLA2RUH7 354 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 KLRC4O43908 158 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 STAU1O95793 577 aaKnown RBP22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 MYL1P05976 194 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 CMA1P23946 247 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 ACAT1P24752 427 aaKnown RBP22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 NELFCDQ8IXH7 590 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 CEP57L1Q8IYX8 460 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 CELF5Q8N6W0 485 aaKnown RBP22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 GOLGA5Q8TBA6 731 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 FAM126AQ9BYI3 521 aaPredicted RBP22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 SLC39A2Q9NP94 309 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 CDH9Q9ULB4 789 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 HPSEQ9Y251 543 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 PCDHGA2Q9Y5H1 932 aa22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 KIF26AQ9ULI4 1882 aaPredicted RBP22.02■■□□□ 1.12
PDLIM4-205ENST00000463615 FAM237AA0A1B0GTK4 181 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms