RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 PI4K2AQ9BTU6 479 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 ABCB6Q9NP58 842 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 GDE1Q9NZC3 331 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 DUSP12Q9UNI6 340 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 NUMBLQ9Y6R0 609 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 NOTCH4Q99466 2003 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 MYBPHLA2RUH7 354 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 SLC16A3O15427 465 aaKnown RBP20.15■□□□□ 0.82
COL9A3-203ENST00000462700 ATP2C2O75185 946 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 MOSPD3O75425 235 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 CLSTN1O94985 981 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 PDGFRBP09619 1106 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 GNL1P36915 607 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-203ENST00000462700 PIK3CAP42336 1068 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 GCLMP48507 274 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 VEPH1Q14D04 833 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 CAMK4Q16566 473 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 POTEHQ6S545 545 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 PARM1Q6UWI2 310 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 MTSS1LQ765P7 747 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 DNAJB7Q7Z6W7 309 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-203ENST00000462700 ITIH5Q86UX2 942 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 SLC44A3Q8N4M1 653 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 ST13P5Q8NFI4 369 aaPredicted RBP20.15■□□□□ 0.82
COL9A3-203ENST00000462700 OR6B3Q8NGW1 331 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 FAM200AQ8TCP9 573 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 FGF14Q92915 247 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 ELMO3Q96BJ8 720 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 IPO9Q96P70 1041 aaKnown RBP20.15■□□□□ 0.82
COL9A3-203ENST00000462700 SMYD3Q9H7B4 428 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 NME7Q9Y5B8 376 aa20.15■□□□□ 0.82
COL9A3-203ENST00000462700 TRIOO75962 3097 aa20.14■□□□□ 0.82
COL9A3-203ENST00000462700 PPP1R3GB7ZBB8 358 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 ASS1P00966 412 aaKnown RBP20.14■□□□□ 0.81
COL9A3-203ENST00000462700 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 CFAP221Q4G0U5 840 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 SCARA5Q6ZMJ2 495 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 HFE2Q6ZVN8 426 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 SPATA2LQ8IUW3 424 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-203ENST00000462700 GIPC2Q8TF65 315 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 TAF4BQ92750 862 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 FUBP3Q96I24 572 aaKnown RBP eCLIP20.14■□□□□ 0.81
COL9A3-203ENST00000462700 MMRN2Q9H8L6 949 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 TMEM8AQ9HCN3 771 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 ZNF334Q9HCZ1 680 aaPredicted RBP20.14■□□□□ 0.81
COL9A3-203ENST00000462700 CRTAC1Q9NQ79 661 aa20.14■□□□□ 0.81
COL9A3-203ENST00000462700 NARSO43776 548 aaKnown RBP20.13■□□□□ 0.81
COL9A3-203ENST00000462700 P4HA1P13674 534 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 GJA1P17302 382 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 CYP2F1P24903 491 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 GTF2H1P32780 548 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 RAP1GAPP47736 663 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 GPR15P49685 360 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 CDH8P55286 799 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 MAPRE1Q15691 268 aaKnown RBP20.13■□□□□ 0.81
COL9A3-203ENST00000462700 KLHL10Q6JEL2 608 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 C4orf50Q6ZRC1 276 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 BMP8AQ7Z5Y6 402 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 TRIML1Q8N9V2 468 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 SHKBP1Q8TBC3 707 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 TAS1R2Q8TE23 839 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 MYLPFQ96A32 169 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 RPP25Q9BUL9 199 aaKnown RBP20.13■□□□□ 0.81
COL9A3-203ENST00000462700 KIAA1468Q9P260 1216 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 DOCK8Q8NF50 2099 aa20.13■□□□□ 0.81
COL9A3-203ENST00000462700 DOCK6Q96HP0 2047 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 A0A1W2PRU2 124 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 A8MXQ7 604 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 TEAD2Q15562 447 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 KRT39Q6A163 491 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 SPOPLQ6IQ16 392 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 TTI2Q6NXR4 508 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 FOXR2Q6PJQ5 311 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 MYCBPAPQ8TBZ2 947 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 GPR152Q8TDT2 470 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 DUSP9Q99956 384 aaKnown RBP20.12■□□□□ 0.81
COL9A3-203ENST00000462700 IMPG2Q9BZV3 1241 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 SDCBP2Q9H190 292 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 DPEP3Q9H4B8 488 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 CTNND2Q9UQB3 1225 aa20.12■□□□□ 0.81
COL9A3-203ENST00000462700 STX10O60499 249 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 FGF19O95750 216 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 SRFP11831 508 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 GABRR2P28476 465 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 MAGEA11P43364 429 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 MXI1P50539 228 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 RPL10AP62906 217 aaKnown RBP20.11■□□□□ 0.81
COL9A3-203ENST00000462700 DDR2Q16832 855 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 MDH1BQ5I0G3 518 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 SDHAF4Q5VUM1 108 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 GAREM2Q75VX8 874 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 PBXIP1Q96AQ6 731 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 PCED1BQ96HM7 432 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 CEP63Q96MT8 703 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 ASB16Q96NS5 453 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 KXD1Q9BQD3 176 aa20.11■□□□□ 0.81
COL9A3-203ENST00000462700 CLSTN2Q9H4D0 955 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms