RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 POLIQ9UNA4 740 aa5.63□□□□□ -1.51
PDCD4-204ENST00000462577 TRIM33Q9UPN9 1127 aa5.63□□□□□ -1.51
PDCD4-204ENST00000462577 INPP5FQ9Y2H2 1132 aa5.63□□□□□ -1.51
PDCD4-204ENST00000462577 IRAK3Q9Y616 596 aa5.63□□□□□ -1.51
PDCD4-204ENST00000462577 MTCH2Q9Y6C9 303 aa5.63□□□□□ -1.51
PDCD4-204ENST00000462577 COL4A2P08572 1712 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 MIA3Q5JRA6 1907 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 COL6A3P12111 3177 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TISP43B9A030 160 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 PDXKO00764 312 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 NRP1O14786 923 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 MAPK13O15264 365 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 GRM6O15303 877 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 XPOTO43592 962 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 EXTL3O43909 919 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZC3H11AO75152 810 aaKnown RBP eCLIP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SMC2O95347 1197 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 POMCP01189 267 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ALDH2P05091 517 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 RPLP1P05386 114 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 CXCL8P10145 99 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 CTSAP10619 480 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 NPR3P17342 541 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 DNAJB1P25685 340 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 MZF1P28698 734 aaPredicted RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 LRPAP1P30533 357 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 RPL9P32969 192 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 PPP1R2P41236 205 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TNFSF9P41273 254 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ALDH7A1P49419 539 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ATP11AP98196 1134 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 KRT17Q04695 432 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ENPEPQ07075 957 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 PNOCQ13519 176 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 UPP1Q16831 310 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 KNOP1Q1ED39 458 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZCWPW2Q504Y3 356 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZBTB41Q5SVQ8 909 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SPOUT1Q5T280 376 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZNF658Q5TYW1 1059 aaPredicted RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ALKBH2Q6NS38 261 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ARMCX5Q6P1M9 558 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 XKR5Q6UX68 686 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 BRSK2Q8IWQ3 736 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZC3H3Q8IXZ2 948 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 THNSL1Q8IYQ7 743 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SYCP3Q8IZU3 236 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 GPD1LQ8N335 351 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TRIML1Q8N9V2 468 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 POMGNT1Q8WZA1 660 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SMARCE1Q969G3 411 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 FAM161BQ96MY7 647 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZMAT2Q96NC0 199 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 COLEC11Q9BWP8 271 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 VN1R3Q9BXE9 311 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 ZBP1Q9H171 429 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 CXCL16Q9H2A7 254 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 NSUN3Q9H649 340 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 RPF1Q9H9Y2 349 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 CERS4Q9HA82 394 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SLC39A2Q9NP94 309 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TLR9Q9NR96 1032 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 AGPAT3Q9NRZ7 376 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 LMBRD1Q9NUN5 540 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 DMAC2Q9NW81 257 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 PARP2Q9UGN5 583 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 MTUS1Q9ULD2 1270 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 UBQLN1Q9UMX0 589 aaKnown RBP5.62□□□□□ -1.51
PDCD4-204ENST00000462577 TRAF3IP3Q9Y228 551 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 SSX2IPQ9Y2D8 614 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 FAN1Q9Y2M0 1017 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 GDAQ9Y2T3 454 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 C2CD2Q9Y426 696 aa5.62□□□□□ -1.51
PDCD4-204ENST00000462577 RFXAPO00287 272 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 NCK2O43639 380 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 DEAF1O75398 565 aaPredicted RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 PRPF40AO75400 957 aaKnown RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SF3B1O75533 1304 aaKnown RBP eCLIP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 KIF4AO95239 1232 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 PAPLNO95428 1278 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SOD2P04179 222 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 HARSP12081 509 aaKnown RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 IBSPP21815 317 aaPredicted RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 MATR3P43243 847 aaKnown RBP eCLIP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 AARSP49588 968 aaKnown RBP eCLIP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 ACOT2P49753 483 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 OSTNP61366 133 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 CREMQ03060 361 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SOX4Q06945 474 aaPredicted RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 ELAVL2Q12926 359 aaKnown RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 KCNC3Q14003 757 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SMC1AQ14683 1233 aaKnown RBP5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SURF1Q15526 300 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 EDRF1Q3B7T1 1238 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 SPATA1Q5VX52 437 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 CEP135Q66GS9 1140 aa5.61□□□□□ -1.51
PDCD4-204ENST00000462577 PDXDC1Q6P996 788 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms