RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ZFPM1Q8IX07 1006 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 ANKRD13CQ8N6S4 541 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 SLC7A6OSQ96CW6 309 aaPredicted RBP5.86□□□□□ -1.47
COPS3-204ENST00000462236 FDXACB1Q9BRP7 624 aaPredicted RBP5.86□□□□□ -1.47
COPS3-204ENST00000462236 IDI2Q9BXS1 227 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 TMOD2Q9NZR1 351 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 SCOCQ9UIL1 159 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 G3BP2Q9UN86 482 aaKnown RBP5.86□□□□□ -1.47
COPS3-204ENST00000462236 ZHX2Q9Y6X8 837 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 A0A0G2JMZ2 1700 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 MROH5Q6ZUA9 1318 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 MYBBP1AQ9BQG0 1328 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 A0A1B0GTL3 188 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 MTSS1O43312 755 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 PLIN1O60240 522 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 NOBOXO60393 691 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CTNND1O60716 968 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 PHF2O75151 1096 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 NDUFS2O75306 463 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 LTA4HP09960 611 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 AKAP5P24588 427 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CFPP27918 469 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 GCLCP48506 637 aaPredicted RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 MRE11P49959 708 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 STAT5BP51692 787 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 SLC16A1P53985 500 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 WNT3AP56704 352 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CALD1Q05682 793 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 CCDC57Q2TAC2 916 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 GAGE13Q4V321 117 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 NXNQ6DKJ4 435 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CXorf57Q6NSI4 855 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 USP30Q70CQ3 517 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 LARP4Q71RC2 724 aaKnown RBP eCLIP5.85□□□□□ -1.47
COPS3-204ENST00000462236 TAS1R1Q7RTX1 841 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 ADGRG2Q8IZP9 1017 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 USP38Q8NB14 1042 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 TET1Q8NFU7 2136 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 RELTQ969Z4 430 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CSRNP2Q9H175 543 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 CNNM1Q9NRU3 951 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 ZIM2Q9NZV7 527 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 SAP30BPQ9UHR5 308 aaKnown RBP5.85□□□□□ -1.47
COPS3-204ENST00000462236 DNAI1Q9UI46 699 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 ZNF180Q9UJW8 692 aa5.85□□□□□ -1.47
COPS3-204ENST00000462236 WDFY4Q6ZS81 3184 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 TRIP12Q14669 1992 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 UTYO14607 1347 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 GAKO14976 1311 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 SALL1Q9NSC2 1324 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 APAF1O14727 1248 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 ENTPD3O75355 529 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 LY86O95711 162 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 GAAP10253 952 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 OSMP13725 252 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 ZSCAN20P17040 1043 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 CYP2C19P33261 490 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 CDK17Q00537 523 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 TCP10Q12799 353 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 CHAF1AQ13111 956 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 SHHQ15465 462 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 TWISTNBQ3B726 338 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 RABL6Q3YEC7 729 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 LRRC24Q50LG9 513 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 C9orf50Q5SZB4 431 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 GADL1Q6ZQY3 521 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 C1QL4Q86Z23 238 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 KBTBD2Q8IY47 623 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 CHPFQ8IZ52 775 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 LGI4Q8N135 537 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 GLB1L3Q8NCI6 653 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 SMCR8Q8TEV9 937 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 GCDHQ92947 438 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 HSPBAP1Q96EW2 488 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 UIMC1Q96RL1 719 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 STK31Q9BXU1 1019 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 RHOBTB2Q9BYZ6 727 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 SLC6A15Q9H2J7 730 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.84□□□□□ -1.47
COPS3-204ENST00000462236 ZDHHC9Q9Y397 364 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 SLC4A7Q9Y6M7 1214 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 TRIOO75962 3097 aa5.84□□□□□ -1.47
COPS3-204ENST00000462236 DDTLA6NHG4 134 aaPredicted RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 FAM171A2A8MVW0 826 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 GRM8O00222 908 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 TSPAN6O43657 245 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 PDE8BO95263 885 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 PARNO95453 639 aaKnown RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 CT47B1P0C2W7 299 aaPredicted RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 C5AR1P21730 350 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 PRDX5P30044 214 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 CCND3P30281 292 aaPredicted RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 HOXA7P31268 230 aaPredicted RBP5.83□□□□□ -1.48
COPS3-204ENST00000462236 MCAMP43121 646 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 KIR2DL3P43628 341 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 CD69Q07108 199 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 MGAT5Q09328 741 aa5.83□□□□□ -1.48
COPS3-204ENST00000462236 MGAT2Q10469 447 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms