RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 LRRC3BQ96PB8 259 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 ACBD6Q9BR61 282 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 MTMR12Q9C0I1 747 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 CUEDC2Q9H467 287 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 ABCB6Q9NP58 842 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 TMLHEQ9NVH6 421 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 DDX43Q9NXZ2 648 aaKnown RBP12.8□□□□□ -0.36
SCAMP3-203ENST00000462151 ZNF233A6NK53 670 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 PPP6R2O75170 966 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 KRT19P08727 400 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 PCSK1P29120 753 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 CTHP32929 405 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 AVPR1AP37288 418 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 CXCL12P48061 93 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SOX9P48436 509 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 LHX1P48742 406 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 MYO1EQ12965 1108 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SURF1Q15526 300 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 INTS6LQ5JSJ4 861 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 DGKKQ5KSL6 1271 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SPEM1Q8N4L4 309 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 GPR161Q8N6U8 529 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 ZFYVE19Q96K21 471 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SLC46A2Q9BY10 475 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 TRIM9Q9C026 710 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 KIAA1586Q9HCI6 787 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 KBTBD4Q9NVX7 518 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 GTSE1Q9NYZ3 720 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
SCAMP3-203ENST00000462151 EIF3DO15371 548 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 YEATS4O95619 227 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 TNNC2P02585 160 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 F11P03951 625 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 NLRP12P59046 1061 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 ASIC1P78348 528 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 E2F4Q16254 413 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 ITPRIPL2Q3MIP1 535 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 TXNDC11Q6PKC3 985 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 DPH6Q7L8W6 267 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 TMEM150AQ86TG1 271 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 IQUBQ8NA54 791 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 MRPS31Q92665 395 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 DHX58Q96C10 678 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 KIF9Q9HAQ2 790 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 RBM12Q9NTZ6 932 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 SIX4Q9UIU6 781 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 MAGED2Q9UNF1 606 aaPredicted RBP12.78□□□□□ -0.36
SCAMP3-203ENST00000462151 CUTAO60888 179 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 PAPSS2O95340 614 aaPredicted RBP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 ACAT1P24752 427 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 CYP2F1P24903 491 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GPR15P49685 360 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 SATB1Q01826 763 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 TNK2Q07912 1038 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GAS6Q14393 721 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 PUM1Q14671 1186 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 DDR2Q16832 855 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 DUOXA2Q1HG44 320 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 CNNM4Q6P4Q7 775 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 OSTM1Q86WC4 334 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 SPATA2LQ8IUW3 424 aaPredicted RBP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 SYNPOQ8N3V7 929 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 HPS3Q969F9 1004 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 TRMT2BQ96GJ1 504 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 FAM84AQ96KN4 292 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 PKMYT1Q99640 499 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 HSPBP1Q9NZL4 362 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GTF3C4Q9UKN8 822 aa12.77□□□□□ -0.37
SCAMP3-203ENST00000462151 GABRDO14764 452 aa12.76□□□□□ -0.37
SCAMP3-203ENST00000462151 NOL4O94818 638 aa12.76□□□□□ -0.37
SCAMP3-203ENST00000462151 SDHBP21912 280 aa12.76□□□□□ -0.37
SCAMP3-203ENST00000462151 MAGEA11P43364 429 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms