RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CRISPLD1Q9H336 500 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 IFNKQ9P0W0 207 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 DNAJC12Q9UKB3 198 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 GLUD1P00367 558 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 CPB1P15086 417 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 UCHL3P15374 230 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 TSPY1Q01534 308 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 ADCY1Q08828 1119 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 LLGL2Q6P1M3 1020 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 ACOT1Q86TX2 421 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 TTC39CQ8N584 583 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 TTC9BQ8N6N2 239 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 ATAD1Q8NBU5 361 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 B3GALNT2Q8NCR0 500 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 PGLYRP2Q96PD5 576 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 XPO4Q9C0E2 1151 aaKnown RBP12.02□□□□□ -0.49
SSBP1-202ENST00000461433 GPR88Q9GZN0 384 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 FAM207AQ9NSI2 230 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-202ENST00000461433 AFF4Q9UHB7 1163 aaKnown RBP12.02□□□□□ -0.49
SSBP1-202ENST00000461433 FBXW11Q9UKB1 542 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 FHOD1Q9Y613 1164 aa12.02□□□□□ -0.49
SSBP1-202ENST00000461433 A0A1W2PQC6 194 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 ZNF132P52740 706 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 MFAP3P55082 362 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 DLX2Q07687 328 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-202ENST00000461433 ZNF394Q53GI3 561 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 PAQR9Q6ZVX9 377 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 ENOSF1Q7L5Y1 443 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
SSBP1-202ENST00000461433 C12orf29Q8N999 325 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 KREMEN2Q8NCW0 462 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 SHC3Q92529 594 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 PABPC5Q96DU9 382 aaKnown RBP12.01□□□□□ -0.49
SSBP1-202ENST00000461433 PCED1BQ96HM7 432 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 TMEM176AQ96HP8 235 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 NT5C1AQ9BXI3 368 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 CLEC1BQ9P126 229 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 PRUNE2Q8WUY3 3088 aa12.01□□□□□ -0.49
SSBP1-202ENST00000461433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 FOXN3O00409 490 aaPredicted RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 NCK2O43639 380 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TBX10O75333 385 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 YWHAEP62258 255 aaKnown RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 SMARCB1Q12824 385 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 DUSP4Q13115 394 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 ARHGAP44Q17R89 818 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 MDH1BQ5I0G3 518 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 SARM1Q6SZW1 724 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TMEM270Q6UE05 265 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TCEAL8Q8IYN2 117 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 HDAC7Q8WUI4 952 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PPM1EQ8WY54 764 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TNIP3Q96KP6 325 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 FAM81BQ96LP2 452 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 B3GNT5Q9BYG0 378 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 RHOBTB2Q9BYZ6 727 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PLEKHA4Q9H4M7 779 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 MAN1C1Q9NR34 630 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 MAFFQ9ULX9 164 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 SLC27A5Q9Y2P5 690 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 COL6A3P12111 3177 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 FSD2A1L4K1 749 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 CLDN5O00501 218 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PAPLNO95428 1278 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 CALCAP01258 141 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 RFX1P22670 979 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 JAM2P57087 298 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 POLR2FP61218 127 aaKnown RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 DRAP1Q14919 205 aaPredicted RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 NFE2Q16621 373 aaPredicted RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 CFAP221Q4G0U5 840 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 SYCE2Q6PIF2 218 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 FUKQ8N0W3 1084 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 NEK11Q8NG66 645 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 C2orf15Q8WU43 125 aaKnown RBP12□□□□□ -0.49
SSBP1-202ENST00000461433 CASP10Q92851 521 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 MYLPFQ96A32 169 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 ZSWIM1Q9BR11 485 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 STK33Q9BYT3 514 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TTYH3Q9C0H2 523 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 TMEM30AQ9NV96 361 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 CLDND1Q9NY35 253 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 HSFX1Q9UBD0 423 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 PCDHB5Q9Y5E4 795 aa12□□□□□ -0.49
SSBP1-202ENST00000461433 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 C2orf16Q68DN1 1984 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 RFPL2O75678 378 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 ZMYND10O75800 440 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 HAPLN1P10915 354 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-202ENST00000461433 CCDC130P13994 396 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 CYP2F1P24903 491 aa11.99□□□□□ -0.49
SSBP1-202ENST00000461433 CACNA2D1P54289 1103 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms