RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
C9orf78-202ENST00000461349 ANAPC1Q9H1A4 1944 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 ACACAQ13085 2346 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 CYP3A5P20815 502 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 MUTP22033 750 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 HOXD12P35452 270 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 PTGER3P43115 390 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 SEC13P55735 322 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 NLRP12P59046 1061 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 SPAG1Q07617 926 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 STRN3Q13033 797 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 ZNF268Q14587 947 aaPredicted RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 MTF1Q14872 753 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 SEZ6Q53EL9 994 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 SPDYCQ5MJ68 293 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 OLIG1Q8TAK6 271 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 USP33Q8TEY7 942 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 WHAMMQ8TF30 809 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 C2orf15Q8WU43 125 aaKnown RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 TNFRSF25Q93038 417 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 LRIG1Q96JA1 1093 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 BBC3Q96PG8 261 aaPredicted RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 ZSWIM6Q9HCJ5 1215 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 BCCIPQ9P287 314 aaKnown RBP eCLIP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 MBD1Q9UIS9 605 aaPredicted RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 MMP17Q9ULZ9 603 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 SLC6A14Q9UN76 642 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 PCDHB9Q9Y5E1 797 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 ATXN2Q99700 1313 aaKnown RBP13.8□□□□□ -0.2
C9orf78-202ENST00000461349 GON4LQ3T8J9 2241 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
C9orf78-202ENST00000461349 ABLIM1O14639 778 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 TOM1L1O75674 476 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 CXCL8P10145 99 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 P2RY2P41231 377 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 MATR3P43243 847 aaKnown RBP eCLIP13.79□□□□□ -0.2
C9orf78-202ENST00000461349 FAM193AP78312 1265 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 PPP2R3AQ06190 1150 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 SCRN1Q12765 414 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 CRY1Q16526 586 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 TXNDC8Q6A555 127 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 RABEPKQ7Z6M1 372 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 MON1AQ86VX9 555 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 SPPL2BQ8TCT7 592 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 RLN3Q8WXF3 142 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 ARHGAP28Q9P2N2 729 aa13.79□□□□□ -0.2
C9orf78-202ENST00000461349 CLDN3O15551 220 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 F11P03951 625 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 PAX3P23760 479 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 MCM7P33993 719 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 CDR1P51861 262 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 C19orf57Q0VDD7 668 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
C9orf78-202ENST00000461349 TAS1R3Q7RTX0 852 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 THEM5Q8N1Q8 247 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 MINDY1Q8N5J2 469 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 OR10T2Q8NGX3 314 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 ZBTB45Q96K62 511 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-202ENST00000461349 SENP8Q96LD8 212 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 DRC1Q96MC2 740 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 FNBP1Q96RU3 617 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 TMEM60Q9H2L4 133 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-202ENST00000461349 ORC3Q9UBD5 711 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-202ENST00000461349 PILRBQ9UKJ0 227 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 MAGED2Q9UNF1 606 aaPredicted RBP13.78□□□□□ -0.2
C9orf78-202ENST00000461349 WNT6Q9Y6F9 365 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 SCN1AP35498 2009 aa13.78□□□□□ -0.2
C9orf78-202ENST00000461349 WNT7AO00755 349 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 AP5Z1O43299 807 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 REC8O95072 547 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 NFATC1O95644 943 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 CKMP06732 381 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 SERPINF2P08697 491 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 CLTAP09496 248 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 USP17L7P0C7H9 530 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 HAPLN1P10915 354 aaPredicted RBP13.77□□□□□ -0.21
C9orf78-202ENST00000461349 ITPKAP23677 461 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
C9orf78-202ENST00000461349 LILRA4P59901 499 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 MRPS21P82921 87 aaKnown RBP13.77□□□□□ -0.21
C9orf78-202ENST00000461349 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
C9orf78-202ENST00000461349 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.21
C9orf78-202ENST00000461349 METTL23Q86XA0 190 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 PGBD3Q8N328 593 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 TMEM130Q8N3G9 435 aa13.77□□□□□ -0.21
C9orf78-202ENST00000461349 RIN3Q8TB24 985 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms