RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 RAD23BP54727 409 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 MOGSQ13724 837 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 STILQ15468 1287 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 P3H1Q32P28 736 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 PTPN20Q4JDL3 420 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 SEZ6Q53EL9 994 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 ZC3H12AQ5D1E8 599 aaKnown RBP10.4□□□□□ -0.75
DHFR2-203ENST00000461173 UBAP2Q5T6F2 1119 aaKnown RBP10.4□□□□□ -0.75
DHFR2-203ENST00000461173 RNF187Q5TA31 235 aaPredicted RBP10.4□□□□□ -0.75
DHFR2-203ENST00000461173 EFCAB12Q6NXP0 572 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 ARHGEF18Q6ZSZ5 1173 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 VSIG1Q86XK7 387 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 CCDC13Q8IYE1 715 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 CXorf38Q8TB03 319 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 AFG1LQ8WV93 481 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 CKAP2Q8WWK9 683 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 GRAMD1AQ96CP6 724 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 MCRS1Q96EZ8 462 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 SGSM3Q96HU1 749 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 PRMT1Q99873 361 aaKnown RBP10.4□□□□□ -0.75
DHFR2-203ENST00000461173 SLC24A2Q9UI40 661 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 SIX4Q9UIU6 781 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 ZNF148Q9UQR1 794 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 C2CD2Q9Y426 696 aa10.4□□□□□ -0.75
DHFR2-203ENST00000461173 ANK1P16157 1881 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 GOLGB1Q14789 3259 aaKnown RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 INO80B-WBP1J3KQ70 363 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 SNX3O60493 162 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 CILPO75339 1184 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 RASSF9O75901 435 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 DNAJC8O75937 253 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 VDRP11473 427 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 SSR1P43307 286 aaKnown RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 PSEN1P49768 467 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 PRKG1Q13976 671 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 TRIP13Q15645 432 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 AMHR2Q16671 573 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 KCTD19Q17RG1 926 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 RNASEH2BQ5TBB1 312 aaKnown RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 LRRC34Q8IZ02 419 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 C1orf127Q8N9H9 656 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 CMASQ8NFW8 434 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 MAML1Q92585 1016 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 NCAPGQ9BPX3 1015 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 INO80BQ9C086 356 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 IFT122Q9HBG6 1241 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 TXNRD2Q9NNW7 524 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 SSU72Q9NP77 194 aaKnown RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 NAALADL1Q9UQQ1 740 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-203ENST00000461173 SBF1O95248 1867 aa10.39□□□□□ -0.75
DHFR2-203ENST00000461173 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 LRRD1A4D1F6 860 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 H0YHG0 523 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 LRCH4O75427 683 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 TXNP10599 105 aaKnown RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ATF7P17544 494 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 PSMA2P25787 234 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 MARK3P27448 753 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ARSEP51690 589 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 XRCC4Q13426 336 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 LLGL1Q15334 1064 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ATP13A4Q4VNC1 1196 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 DAB2IPQ5VWQ8 1189 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 EEF1DP3Q658K8 133 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 DENND1BQ6P3S1 775 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 RGS9BPQ6ZS82 235 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 CENPUQ71F23 418 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 TRIM50Q86XT4 487 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 XYLT1Q86Y38 959 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 KAT2BQ92831 832 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 OTUD5Q96G74 571 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 MAGEB18Q96M61 343 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ITGA11Q9UKX5 1188 aa10.38□□□□□ -0.75
DHFR2-203ENST00000461173 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
DHFR2-203ENST00000461173 ZNF487B1APH4 448 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 E7ESA3 106 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 GPR25O00155 361 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 ENDOD1O94919 500 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 GJB6O95452 261 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 STAG3L1P0CL83 205 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 CXCL8P10145 99 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 HOXD8P13378 290 aaPredicted RBP10.37□□□□□ -0.75
DHFR2-203ENST00000461173 KRT10P13645 584 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 BRAFP15056 766 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 KDELR1P24390 212 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 RFC1P35251 1148 aaPredicted RBP10.37□□□□□ -0.75
DHFR2-203ENST00000461173 SCTRP47872 440 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 PSMC1P62191 440 aaKnown RBP10.37□□□□□ -0.75
DHFR2-203ENST00000461173 ARHGAP1Q07960 439 aa10.37□□□□□ -0.75
DHFR2-203ENST00000461173 WDR72Q3MJ13 1102 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms