RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 FAM71AQ8IYT1 594 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 DCP1BQ8IZD4 617 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 MRPL43Q8N983 215 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 SLC4A11Q8NBS3 891 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 SPC24Q8NBT2 197 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 ZNF397Q8NF99 534 aaPredicted RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 BAP1Q92560 729 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 TMEM176AQ96HP8 235 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 HEXIM2Q96MH2 286 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 KLHL5Q96PQ7 755 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 CLSTN3Q9BQT9 956 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 CRTAC1Q9NQ79 661 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 FAM49BQ9NUQ9 324 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 CAPN11Q9UMQ6 739 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 CNTN6Q9UQ52 1028 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 LUC7L2Q9Y383 392 aaKnown RBP10.83□□□□□ -0.68
UPF2-204ENST00000460569 IRAK3Q9Y616 596 aa10.83□□□□□ -0.68
UPF2-204ENST00000460569 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 MYBPHLA2RUH7 354 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 CYP26A1O43174 497 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 CALCAP01258 141 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 PAEPP09466 180 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 CCDC130P13994 396 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 KLRC2P26717 231 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 GNA15P30679 374 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ZBED6P86452 979 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 CYP27A1Q02318 531 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ARID5AQ03989 594 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 PTK2Q05397 1052 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 MAPRE1Q15691 268 aaKnown RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 ASIC2Q16515 512 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 NFE2Q16621 373 aaPredicted RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 SGO2Q562F6 1265 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 SFMBT2Q5VUG0 894 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ADGRD2Q7Z7M1 963 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 PALB2Q86YC2 1186 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 FMNL3Q8IVF7 1028 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 CRYBG2Q8N1P7 616 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 C12orf29Q8N999 325 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 MYCBPAPQ8TBZ2 947 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ANP32BQ92688 251 aaKnown RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 MYLPFQ96A32 169 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 PGLYRP2Q96PD5 576 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 PKMYT1Q99640 499 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 MED10Q9BTT4 135 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 TMLHEQ9NVH6 421 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 ABI2Q9NYB9 513 aaPredicted RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 MTCL1Q9Y4B5 1905 aaKnown RBP10.82□□□□□ -0.68
UPF2-204ENST00000460569 ATP8B3O60423 1300 aa10.82□□□□□ -0.68
UPF2-204ENST00000460569 PATJQ8NI35 1801 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 CHD7Q9P2D1 2997 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 MTMR11A4FU01 709 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 GOLGA6L6A8MZA4 724 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 AKR1B15C9JRZ8 316 aaPredicted RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 THAP12O43422 761 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 MFAP3LO75121 409 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 GLUD1P00367 558 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 VDRP11473 427 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 FERP16591 822 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 IGFBP4P22692 258 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 ADORA2BP29275 332 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 CLCN1P35523 988 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 KRT9P35527 623 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 PDE6CP51160 858 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 BPIFB4P59827 614 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 GOLGA8FQ08AF8 430 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 GOLGA8DPQ0D2H9 430 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 TBX2Q13207 712 aaPredicted RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 GPR17Q13304 367 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 RAB33AQ14088 237 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 FAM171BQ6P995 826 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 RNF19BQ6ZMZ0 732 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 C4orf50Q6ZRC1 276 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 Q7L0L9 218 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 RBM23Q86U06 439 aaKnown RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 FAM35AQ86V20 835 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 LRRTM3Q86VH5 581 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 SLC47A2Q86VL8 602 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 SPATA2LQ8IUW3 424 aaPredicted RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 CNGA4Q8IV77 575 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 SLC2A14Q8TDB8 520 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 CYFIP2Q96F07 1278 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 PCED1BQ96HM7 432 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 RHOBTB2Q9BYZ6 727 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 NUCKS1Q9H1E3 243 aaKnown RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
UPF2-204ENST00000460569 TLE6Q9H808 572 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 PCDHB5Q9Y5E4 795 aa10.81□□□□□ -0.68
UPF2-204ENST00000460569 O00370 1275 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 CLDN5O00501 218 aa10.8□□□□□ -0.68
UPF2-204ENST00000460569 PER2O15055 1255 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms