RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 EFHC2Q5JST6 749 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ITIH6Q6UXX5 1313 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 HDAC7Q8WUI4 952 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 HAUS1Q96CS2 278 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 AGO3Q9H9G7 860 aaKnown RBP10.45□□□□□ -0.74
EPB41-208ENST00000460378 CTTNBP2NLQ9P2B4 639 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 MAFFQ9ULX9 164 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 KANSL1LA0AUZ9 987 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 LRRC72A6NJI9 287 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PRPSAP2O60256 369 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PLA2G4AP47712 749 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 GRM2Q14416 872 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 FBXO43Q4G163 708 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
EPB41-208ENST00000460378 PIGKQ92643 395 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 TSNARE1Q96NA8 513 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 CLSTN2Q9H4D0 955 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 LMAN1LQ9HAT1 526 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 C2CD2Q9Y426 696 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 CCP110O43303 1012 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 SEC13P55735 322 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 TFF2Q03403 129 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 KDSRQ06136 332 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 VN1R2Q8NFZ6 395 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 TSC1Q92574 1164 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 NFKBIZQ9BYH8 718 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 SCUBE2Q9NQ36 999 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 DNAJC17Q9NVM6 304 aaKnown RBP10.45□□□□□ -0.74
EPB41-208ENST00000460378 CFAP97Q9P2B7 532 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PIAS3Q9Y6X2 628 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 B4GALT5O43286 388 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 CTSEP14091 401 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 CREB5Q02930 508 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 PEX6Q13608 980 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ZC2HC1CQ53FD0 456 aaPredicted RBP10.45□□□□□ -0.74
EPB41-208ENST00000460378 LPCAT2Q7L5N7 544 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 ERCC4Q92889 916 aaPredicted RBP10.45□□□□□ -0.74
EPB41-208ENST00000460378 ZBTB10Q96DT7 871 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 MTMR8Q96EF0 704 aa10.45□□□□□ -0.74
EPB41-208ENST00000460378 AARSP49588 968 aaKnown RBP eCLIP10.44□□□□□ -0.74
EPB41-208ENST00000460378 MAP3K7CLP57077 242 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 LPAL2Q16609 132 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 UGCGQ16739 394 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 EFHC1Q5JVL4 640 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 TRIM48Q8IWZ4 208 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 SLC39A11Q8N1S5 342 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 TTC30BQ8N4P2 665 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 TRIML1Q8N9V2 468 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ZSCAN18Q8TBC5 510 aaPredicted RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 SPPL3Q8TCT6 385 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 HMGB4Q8WW32 186 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 SMARCD2Q92925 531 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 EIF2AQ9BY44 585 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 TASP1Q9H6P5 420 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ZNF623O75123 536 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 DGKIO75912 1065 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ZNF445P59923 1031 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 MYBPC2Q14324 1141 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 PRPF39Q86UA1 669 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 CACUL1Q86Y37 369 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 NUP93Q8N1F7 819 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ZNF461Q8TAF7 563 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 CYFIP2Q96F07 1278 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 CCDC42Q96M95 316 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 RPRD1AQ96P16 312 aaPredicted RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 DHX33Q9H6R0 707 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 YBX2Q9Y2T7 364 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 YIPF1Q9Y548 306 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 COL11A2P13942 1736 aaPredicted RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 HLA-DRAP01903 254 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 NCAM1P13591 858 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 TKTP29401 623 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 ZNF235Q14590 738 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 LEXMQ3ZCV2 418 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 MMTAG2Q9BU76 263 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 VPS16Q9H269 839 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 TBC1D17Q9HA65 648 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 GDE1Q9NZC3 331 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 GCNT4Q9P109 453 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 PCDHA7Q9UN72 937 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 C9IYK1 514 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 ASS1P00966 412 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 PPARGP37231 505 aaPredicted RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 EPAS1Q99814 870 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 MYO1AQ9UBC5 1043 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 VPS28Q9UK41 221 aa10.44□□□□□ -0.74
EPB41-208ENST00000460378 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
EPB41-208ENST00000460378 MYH3P11055 1940 aa10.43□□□□□ -0.74
EPB41-208ENST00000460378 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
EPB41-208ENST00000460378 FAM86C2PA6NEL3 165 aa10.43□□□□□ -0.74
EPB41-208ENST00000460378 EPCAMP16422 314 aa10.43□□□□□ -0.74
EPB41-208ENST00000460378 COL9A1P20849 921 aa10.43□□□□□ -0.74
EPB41-208ENST00000460378 NOP14P78316 857 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms