RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
HDAC4-206ENST00000460235 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 FSCN2O14926 492 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 GRM6O15303 877 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 CYP26A1O43174 497 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 AP5Z1O43299 807 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 THAP12O43422 761 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 MFAP3LO75121 409 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 IPO7O95373 1038 aaKnown RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 GLUD1P00367 558 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 OR1D2P34982 312 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 ZNF132P52740 706 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 RPL10AP62906 217 aaKnown RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 CDK17Q00537 523 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 TBX2Q13207 712 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 ZNF394Q53GI3 561 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 ARHGAP17Q68EM7 881 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 FAM171BQ6P995 826 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 TXLNBQ8N3L3 684 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 UBR7Q8N806 425 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 SLC4A11Q8NBS3 891 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 BAP1Q92560 729 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 SDCBP2Q9H190 292 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 DEF6Q9H4E7 631 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 PLEKHA4Q9H4M7 779 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
HDAC4-206ENST00000460235 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
HDAC4-206ENST00000460235 C2orf71A6NGG8 1288 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TRIM66O15016 1216 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 EPHB6O15197 1021 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TBC1D4O60343 1298 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 LILRB3O75022 631 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
HDAC4-206ENST00000460235 SETSIPP0DME0 302 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 CYP11B1P15538 503 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TNFAIP3P21580 790 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 LMO2P25791 158 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 PRKCIP41743 596 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 MAGEA11P43364 429 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ARPP19P56211 112 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ARID5AQ03989 594 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ARID5BQ14865 1188 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 CFAP221Q4G0U5 840 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 SLC39A12Q504Y0 691 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
HDAC4-206ENST00000460235 MDH1BQ5I0G3 518 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 LIN9Q5TKA1 542 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 PRSS55Q6UWB4 352 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TAS1R1Q7RTX1 841 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TMTC1Q8IUR5 882 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ZNF606Q8WXB4 792 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 KAT5Q92993 513 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 VN1R3Q9BXE9 311 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
HDAC4-206ENST00000460235 TLE6Q9H808 572 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
HDAC4-206ENST00000460235 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 PRRG1O14668 218 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 TEX28O15482 410 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CNPP09543 421 aaKnown RBP13.09□□□□□ -0.31
HDAC4-206ENST00000460235 FAM200BP0CF97 657 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ATF2P15336 505 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ACAT1P24752 427 aaKnown RBP13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CLCN1P35523 988 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDAC4-206ENST00000460235 BCAT1P54687 386 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ERVFC1P60507 584 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CDR2Q01850 454 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ROR1Q01973 937 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 APBA1Q02410 837 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 SCARA3Q6AZY7 606 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 LCLAT1Q6UWP7 414 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 OSTM1Q86WC4 334 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 UBXN6Q9BZV1 441 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 LHX5Q9H2C1 402 aa13.09□□□□□ -0.31
HDAC4-206ENST00000460235 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms