RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 KRT81Q14533 505 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 KCNA10Q16322 511 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 C15orf59Q2T9L4 293 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 GLE1Q53GS7 698 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 SLFN11Q7Z7L1 901 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 PRELID2Q8N945 189 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 FBXO25Q8TCJ0 367 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 MTG1Q9BT17 334 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 DPEP3Q9H4B8 488 aa9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 TRMT13Q9NUP7 481 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-203ENST00000460110 SMIM28A0A1B0GU29 152 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 B3GAT3O94766 335 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 MYBL1P10243 752 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 AFF1P51825 1210 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 KRT17Q04695 432 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 HADHQ16836 314 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 FBXO47Q5MNV8 452 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 EMBQ6PCB8 327 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 MFSD7Q6UXD7 560 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 NETO2Q8NC67 525 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 APPL2Q8NEU8 664 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PWWP2AQ96N64 755 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 ZIM3Q96PE6 472 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 GNEQ9Y223 722 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 CLDN5O00501 218 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 ABLIM1O14639 778 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 OPA1O60313 960 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 ATP2C2O75185 946 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 SLC10A3P09131 477 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 MMP8P22894 467 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 LMO2P25791 158 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 NUMBP49757 651 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 SCNN1GP51170 649 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PTGISQ16647 500 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 DCAF4L1Q3SXM0 396 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PPP1R26Q5T8A7 1209 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 GDF6Q6KF10 455 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 C11orf63Q6NUN7 778 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 MON1BQ7L1V2 547 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 SLC4A11Q8NBS3 891 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 FAM76AQ8TAV0 307 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 HNRNPLLQ8WVV9 542 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 ARL8AQ96BM9 186 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 LRRC45Q96CN5 670 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 NEUROG2Q9H2A3 272 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 RNF186Q9NXI6 227 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 BARX2Q9UMQ3 279 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 R3HDM2Q9Y2K5 976 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 IPPQ9Y573 584 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PCDHA3Q9Y5H8 950 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 CAPN9O14815 690 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PMM2O15305 246 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 XPOTO43592 962 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 DESP17661 470 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 BCAR1P56945 870 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 SLC8A3P57103 927 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PURAQ00577 322 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 RNASELQ05823 741 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 CACNB2Q08289 660 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 SH3PXD2AQ5TCZ1 1133 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PASKQ96RG2 1323 aa9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 UBQLN1Q9UMX0 589 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 PRG3Q9Y2Y8 225 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-203ENST00000460110 RLFQ13129 1914 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 SMIM35A0A1B0GVV1 85 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 PRPSAP2O60256 369 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 FAM189A1O60320 539 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 PHF2O75151 1096 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 ATF2P15336 505 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 CDH6P55285 790 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 C1orf228Q6PIY5 440 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 LEKR1Q6ZMV7 388 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 TRPV1Q8NER1 839 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 ERP44Q9BS26 406 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 LRRC4Q9HBW1 653 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 CALCOCO1Q9P1Z2 691 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 KPNA7A9QM74 516 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 DUSP11O75319 330 aaKnown RBP9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 ZSCAN5DPP0CG00 497 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 IGFBP6P24592 240 aaPredicted RBP9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 COILP38432 576 aaPredicted RBP9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 GRM5P41594 1212 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 WSCD1Q658N2 575 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 OLIG1Q8TAK6 271 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 SLC2A14Q8TDB8 520 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 RAPGEF5Q92565 580 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 SELENOSQ9BQE4 189 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 SLITRK6Q9H5Y7 841 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 GJD2Q9UKL4 321 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 LOC102724159A0A0B4J2E5 919 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 H7C0C1 242 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 CYB561D2O14569 222 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 ATP8B1O43520 1251 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 CST8O60676 142 aa9.86□□□□□ -0.83
NUDCD3-203ENST00000460110 ERBB2P04626 1255 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms