RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 MTMR11A4FU01 709 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CCL16O15467 120 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ZMYND10O75800 440 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LRG1P02750 347 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 TRIM21P19474 475 aaKnown RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 SLC9A1P19634 815 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 NDST1P52848 882 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 COPB1P53618 953 aaKnown RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CYP27A1Q02318 531 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 INCA1Q0VD86 236 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 SMARCB1Q12824 385 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ORC1Q13415 861 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CUL2Q13617 745 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 NFE2Q16621 373 aaPredicted RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 MGAT5BQ3V5L5 792 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LEXMQ3ZCV2 418 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 MDH1BQ5I0G3 518 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ATAT1Q5SQI0 421 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 FKBP15Q5T1M5 1219 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LRSAM1Q6UWE0 723 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 RRAGAQ7L523 313 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ACOT1Q86TX2 421 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LUZP1Q86V48 1076 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 TCEAL8Q8IYN2 117 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 MSLNLQ96KJ4 702 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 TNIP3Q96KP6 325 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 PKMYT1Q99640 499 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LPIN3Q9BQK8 851 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 RHOBTB2Q9BYZ6 727 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 S1PR5Q9H228 398 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 ADAM7Q9H2U9 754 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 DPEP3Q9H4B8 488 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CRTAC1Q9NQ79 661 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 CISHQ9NSE2 258 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 TMLHEQ9NVH6 421 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 LIMA1Q9UHB6 759 aaKnown RBP11.58□□□□□ -0.56
CCDC12-204ENST00000460035 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
CCDC12-204ENST00000460035 NUP210Q8TEM1 1887 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 HELZP42694 1942 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 XYLBO75191 536 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 VNN2O95498 520 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 HNRNPA1P09651 372 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ATP1A3P13637 1013 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 TBXAS1P24557 533 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 PON1P27169 355 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 HOXA9P31269 272 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ALDH1A3P47895 512 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 TUFMP49411 452 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 YWHAEP62258 255 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ITIH3Q06033 890 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 MAPRE1Q15691 268 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 CCDC142Q17RM4 750 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 PTCRAQ6ISU1 281 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 PHLDB3Q6NSJ2 640 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 FAM171BQ6P995 826 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 C4orf50Q6ZRC1 276 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 UNC93AQ86WB7 457 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ARHGEF19Q8IW93 802 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 FAM200AQ8TCP9 573 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 SPPL2BQ8TCT7 592 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 C2orf15Q8WU43 125 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 SMG7Q92540 1137 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 MYLPFQ96A32 169 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 HEXIM2Q96MH2 286 aaKnown RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 SEPT5Q99719 369 aaPredicted RBP11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ARID3AQ99856 593 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 MED10Q9BTT4 135 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 NT5C1AQ9BXI3 368 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 ZDHHC7Q9NXF8 308 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 HMGXB4Q9UGU5 601 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 PCDHB4Q9Y5E5 795 aa11.57□□□□□ -0.56
CCDC12-204ENST00000460035 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 MBTPS2O43462 519 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 CILPO75339 1184 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 SOAT2O75908 522 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 POU2F2P09086 479 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 HAPLN1P10915 354 aaPredicted RBP11.56□□□□□ -0.56
CCDC12-204ENST00000460035 CYP2F1P24903 491 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 KCNQ1P51787 676 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 MFAP3P55082 362 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 ZNF445P59923 1031 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 APBA1Q02410 837 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 UBXN1Q04323 297 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 TWF1Q12792 350 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 PLD1Q13393 1074 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 SMAD4Q13485 552 aaKnown RBP11.56□□□□□ -0.56
CCDC12-204ENST00000460035 TAF12Q16514 161 aa11.56□□□□□ -0.56
CCDC12-204ENST00000460035 PUS10Q3MIT2 529 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms