RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 PCDHB13Q9Y5F0 798 aa15.97■□□□□ 0.15
LINC01248-201ENST00000458264 SRPRBQ9Y5M8 271 aaKnown RBP15.97■□□□□ 0.15
LINC01248-201ENST00000458264 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
LINC01248-201ENST00000458264 TSC2P49815 1807 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 VPS37CA5D8V6 355 aaPredicted RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 MYMKA6NI61 221 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 SLC30A4O14863 429 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 HUS1O60921 280 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 ATG13O75143 517 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 PDCP20941 246 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 GARTP22102 1010 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 POLR2BP30876 1174 aaKnown RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 RPL10AP62906 217 aaKnown RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 KCNA1Q09470 495 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 GRSF1Q12849 480 aaKnown RBP eCLIP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 ALCAMQ13740 583 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 TMEM196Q5HYL7 178 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 CC2D1AQ6P1N0 951 aaPredicted RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 PRR23CQ6ZRP0 262 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 MON1AQ86VX9 555 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 TMEM86AQ8N2M4 240 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 PDCL2Q8N4E4 241 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 LRRC52Q8N7C0 313 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 USP13Q92995 863 aaPredicted RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 DNAJC19Q96DA6 116 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 PI4K2AQ9BTU6 479 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 ABCB6Q9NP58 842 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 HPS4Q9NQG7 708 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 OLFML3Q9NRN5 406 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 TBC1D7Q9P0N9 293 aa15.96■□□□□ 0.15
LINC01248-201ENST00000458264 UXTQ9UBK9 157 aaPredicted RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 NUP210Q8TEM1 1887 aaPredicted RBP15.96■□□□□ 0.15
LINC01248-201ENST00000458264 FRYLO94915 3013 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 CCDC163A0A0D9SF12 145 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 TULP1O00294 542 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 TRDMT1O14717 391 aaKnown RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 GCNT3O95395 438 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 ITGB3P05106 788 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 MYL7Q01449 175 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 ZNF268Q14587 947 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 INTS6LQ5JSJ4 861 aaKnown RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 TXNDC8Q6A555 127 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 SYCP3Q8IZU3 236 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 FAM160A2Q8N612 972 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 C1orf127Q8N9H9 656 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 SPATA18Q8TC71 538 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 SAAL1Q96ER3 474 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 EBF3Q9H4W6 596 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 DDX43Q9NXZ2 648 aaKnown RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 RBAKQ9NYW8 714 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 ITGA11Q9UKX5 1188 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 L1RE1Q9UN81 338 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 MAGED2Q9UNF1 606 aaPredicted RBP15.95■□□□□ 0.14
LINC01248-201ENST00000458264 CCL26Q9Y258 94 aa15.95■□□□□ 0.14
LINC01248-201ENST00000458264 EXTL3O43909 919 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 NOL4O94818 638 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 GPR15P49685 360 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 WNT7BP56706 349 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 RBP5P82980 135 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 CUL4AQ13619 759 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 PDGFRLQ15198 375 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 DDR2Q16832 855 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 TRIM68Q6AZZ1 485 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 FSTL4Q6MZW2 842 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 CCDC73Q6ZRK6 1079 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 CSGALNACT2Q8N6G5 542 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 ZSWIM2Q8NEG5 633 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 EXOC4Q96A65 974 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 TRMT2BQ96GJ1 504 aaKnown RBP15.94■□□□□ 0.14
LINC01248-201ENST00000458264 CLIC6Q96NY7 704 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 GDAP2Q9NXN4 497 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 SLC8A2Q9UPR5 921 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 SCN1AP35498 2009 aa15.94■□□□□ 0.14
LINC01248-201ENST00000458264 IDEP14735 1019 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 CYP2F1P24903 491 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 LHX1P48742 406 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 SDHAF4Q5VUM1 108 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 CACNA2D4Q7Z3S7 1137 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 CXorf38Q8TB03 319 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 GAB3Q8WWW8 586 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 LOXL4Q96JB6 756 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 MYRFLQ96LU7 910 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 CNTNAP3BQ96NU0 1288 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 PKMYT1Q99640 499 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 CNTNAP3Q9BZ76 1288 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 TMEM206Q9H813 350 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 GTF3C4Q9UKN8 822 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
LINC01248-201ENST00000458264 SNX9Q9Y5X1 595 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 NCOR2Q9Y618 2525 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 ANK1P16157 1881 aa15.93■□□□□ 0.14
LINC01248-201ENST00000458264 FRMD3A2A2Y4 597 aa15.92■□□□□ 0.14
LINC01248-201ENST00000458264 GOLGA8IPA6NC78 632 aa15.92■□□□□ 0.14
LINC01248-201ENST00000458264 OTOL1A6NHN0 477 aaPredicted RBP15.92■□□□□ 0.14
LINC01248-201ENST00000458264 GOLGA8JA6NMD2 632 aa15.92■□□□□ 0.14
LINC01248-201ENST00000458264 KIAA0391O15091 583 aaKnown RBP15.92■□□□□ 0.14
LINC01248-201ENST00000458264 RPP40O75818 363 aaKnown RBP15.92■□□□□ 0.14
LINC01248-201ENST00000458264 ADRB1P08588 477 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms