RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 SAP30BPQ9UHR5 308 aaKnown RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 PCDHA13Q9Y5I0 950 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 FAM90A8PA6NJQ4 464 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 CD8B2A6NJW9 211 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 ERVV-2B6SEH9 535 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 PPM1GO15355 546 aaPredicted RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 SLC16A3O15427 465 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 SGTAO43765 313 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 BRINP1O60477 761 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 TLR5O60602 858 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 CHEK2O96017 543 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 IL6RP08887 468 aaPredicted RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 FAM90A13PP0C7W8 464 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 FAM90A24PP0C7X0 464 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 ENGP17813 658 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 AGXTP21549 392 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 IL1R2P27930 398 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 LIPAP38571 399 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 CLCN2P51788 898 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 TLE1Q04724 770 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 HYAL1Q12794 435 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 ERV3-1Q14264 604 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 SEMA3AQ14563 771 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 RBMS2Q15434 407 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 TRIM71Q2Q1W2 868 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 CERKLQ49MI3 558 aaPredicted RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 MAVSQ7Z434 540 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 DTX2Q86UW9 622 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 PPM1NQ8N819 430 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 DAZAP1Q96EP5 407 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 MRGPRX4Q96LA9 322 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 NELL2Q99435 816 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 CNPPD1Q9BV87 410 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 FSD1LQ9BXM9 530 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 MRPS18AQ9NVS2 196 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 ADAMTS5Q9UNA0 930 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 SCAF8Q9UPN6 1271 aaKnown RBP2.94□□□□□ -1.94
LINC02540-201ENST00000455554 SH2B3Q9UQQ2 575 aa2.94□□□□□ -1.94
LINC02540-201ENST00000455554 TCF20Q9UGU0 1960 aaKnown RBP2.93□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF785A8K8V0 405 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 H7C1Q1 480 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 FCHO1O14526 889 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 ENPP3O14638 875 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 KRT86O43790 486 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 USP1O94782 785 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 EYA4O95677 639 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 NPSP0C0P6 89 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 PRF1P14222 555 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 CHRM3P20309 590 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 MT3P25713 68 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 HTR6P50406 440 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 PSMC1P62191 440 aaKnown RBP2.93□□□□□ -1.94
LINC02540-201ENST00000455554 HABP2Q14520 560 aaPredicted RBP2.93□□□□□ -1.94
LINC02540-201ENST00000455554 KRT81Q14533 505 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 STAT4Q14765 748 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 CCDC93Q567U6 631 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 TREML2Q5T2D2 321 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 FCRL6Q6DN72 434 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 C9orf47Q6ZRZ4 202 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 Q6ZTC4 211 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 USP43Q70EL4 1123 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 LRRC71Q8N4P6 559 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 AFAP1L2Q8N4X5 818 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 CUL5Q93034 780 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 HDAC10Q969S8 669 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 BRD9Q9H8M2 597 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 RLIMQ9NVW2 624 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 CALCOCO1Q9P1Z2 691 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 PROCRQ9UNN8 238 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 RAD54BQ9Y620 910 aa2.93□□□□□ -1.94
LINC02540-201ENST00000455554 ANKRD62A6NC57 917 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 PRSS44E7EML9 344 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 POC1B-GALNT4F8VUJ3 575 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 ADAM10O14672 748 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 VPS4BO75351 444 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 PRKD3O94806 890 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 ABLIM3O94929 683 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 GJB1P08034 283 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 GNAI3P08754 354 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CHRM5P08912 532 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CYP2A6P11509 494 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 KCNJ5P48544 419 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF135P52742 658 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 GNAI1P63096 354 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 TMPRSS15P98073 1019 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 LEXMQ3ZCV2 418 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 C10orf25Q5T742 122 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 NOP9Q86U38 636 aaKnown RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 GALNT4Q8N4A0 578 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 RP9Q8TA86 221 aaKnown RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CLPTM1LQ96KA5 538 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CTAGE1Q96RT6 745 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 TINAGL1Q9GZM7 467 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 SIK2Q9H0K1 926 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 HIPK2Q9H2X6 1198 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 FOXP1Q9H334 677 aaPredicted RBP2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CAAP1Q9H8G2 361 aa2.92□□□□□ -1.94
LINC02540-201ENST00000455554 CFAP97Q9P2B7 532 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms