RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GKN1Q9NS71 199 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TBC1D7Q9P0N9 293 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CIZ1Q9ULV3 898 aaPredicted RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RBM19Q9Y4C8 960 aaKnown RBP6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PTPRDP23468 1912 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 APC2O95996 2303 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MYOFQ9NZM1 2061 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PTPRJQ12913 1337 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 THADAQ6YHU6 1953 aa6.48□□□□□ -1.37
HLA-DPA3-207ENST00000454398 A0A0B4J269 797 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 C2orf78A6NCI8 922 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LRP3O75074 770 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TBCAO75347 108 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 KRT18P05783 430 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CKMP06732 381 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CENPBP07199 599 aaPredicted RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HMGA1P17096 107 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CYP2F1P24903 491 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CDC25CP30307 473 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 POLR2BP30876 1174 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 AVPR1AP37288 418 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NOVA1P51513 510 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CASP5P51878 434 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SMTNP53814 917 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 HMGN5P82970 282 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TFAMQ00059 246 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ZNF252P-AS1Q0IIN9 211 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MYBPC2Q14324 1141 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DDR2Q16832 855 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PLK5Q496M5 336 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 DGKKQ5KSL6 1271 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RNF43Q68DV7 783 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANO7Q6IWH7 933 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 MAMSTRQ6ZN01 415 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ITIH5Q86UX2 942 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 OSTM1Q86WC4 334 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SFR1Q86XK3 245 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 PDCL2Q8N4E4 241 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SYT2Q8N9I0 419 aaPredicted RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 RASSF8Q8NHQ8 419 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CYP2S1Q96SQ9 504 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 FAM83CQ9BQN1 747 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 LLPHQ9BRT6 129 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TMEM121BQ9BXQ6 578 aaPredicted RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 BLOC1S4Q9NUP1 217 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 CPSF3Q9UKF6 684 aaKnown RBP6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 L1RE1Q9UN81 338 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 SLC8A2Q9UPR5 921 aa6.47□□□□□ -1.37
HLA-DPA3-207ENST00000454398 NBEAQ8NFP9 2946 aa6.46□□□□□ -1.37
HLA-DPA3-207ENST00000454398 TNRC6BQ9UPQ9 1833 aaKnown RBP6.46□□□□□ -1.37
HLA-DPA3-207ENST00000454398 ANO9A1A5B4 782 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GOLGA8IPA6NC78 632 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GOLGA8JA6NMD2 632 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C4orf47A7E2U8 309 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PIRO00625 290 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ATP2C2O75185 946 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PRPF40AO75400 957 aaKnown RBP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KCNK5O95279 499 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PIGRP01833 764 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ITGB3P05106 788 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 NEFLP07196 543 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HAPLN1P10915 354 aaPredicted RBP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HNRNPLP14866 589 aaKnown RBP eCLIP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CYP3A5P20815 502 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GJA4P35212 333 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PRPHP41219 470 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MAPK8P45983 427 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RAP1GAPP47736 663 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 TAF6P49848 677 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PLCB2Q00722 1185 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 KDSRQ06136 332 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GRSF1Q12849 480 aaKnown RBP eCLIP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 USP4Q13107 963 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RUNX3Q13761 415 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PDIA5Q14554 519 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DMC1Q14565 340 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MTF1Q14872 753 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ZNF77Q15935 545 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C2orf27AQ580R0 203 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 HYIQ5T013 277 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 ADALQ6DHV7 355 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 USP49Q70CQ1 688 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DYMQ7RTS9 669 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CACNA2D4Q7Z3S7 1137 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 SCN4BQ8IWT1 228 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 CCDC33Q8N5R6 958 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FRMD1Q8N878 549 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RLN3Q8WXF3 142 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 RAD54LQ92698 747 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 E2F7Q96AV8 911 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 BORCS6Q96GS4 357 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MSANTD3Q96H12 275 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 P2RY13Q9BPV8 354 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 FAM213AQ9BRX8 229 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 MTMR12Q9C0I1 747 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 GPR88Q9GZN0 384 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 C17orf75Q9HAS0 396 aa6.46□□□□□ -1.38
HLA-DPA3-207ENST00000454398 PLEKHA5Q9HAU0 1116 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms