RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RNF169Q8NCN4 708 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 RSPH1Q8WYR4 309 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 INPP4AQ96PE3 977 aaPredicted RBP6□□□□□ -1.45
SBDSP1-204ENST00000453858 FNBP1Q96RU3 617 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 DNAJC2Q99543 621 aaKnown RBP6□□□□□ -1.45
SBDSP1-204ENST00000453858 SENP7Q9BQF6 1050 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 GTPBP2Q9BX10 602 aaKnown RBP6□□□□□ -1.45
SBDSP1-204ENST00000453858 NRSN2Q9GZP1 204 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 TRPV4Q9HBA0 871 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 LRRC4CQ9HCJ2 640 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 ZFP14Q9HCL3 533 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 FBXW11Q9UKB1 542 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 SLC4A4Q9Y6R1 1079 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 DOCK5Q9H7D0 1870 aa6□□□□□ -1.45
SBDSP1-204ENST00000453858 SLC38A8A6NNN8 435 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 NRP1O14786 923 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 ATG13O75143 517 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 ALDH2P05091 517 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 URODP06132 367 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 SERPINF2P08697 491 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 CEBPBP17676 345 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 BMP6P22004 513 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 MAOBP27338 520 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 GBP1P32455 592 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 HOXD12P35452 270 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 ADD2P35612 726 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 TCF7P36402 384 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 VIPR2P41587 438 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 DHPSP49366 369 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 LIG3P49916 1009 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 NLRP12P59046 1061 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 TLE1Q04724 770 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 TTF1Q15361 905 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 FOXD4L6Q3SYB3 417 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 USH1GQ495M9 461 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 PABPC1LQ4VXU2 614 aaKnown RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 NOMO2Q5JPE7 1267 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 PRSS36Q5K4E3 855 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 PCNX4Q63HM2 1172 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 MTHFD1LQ6UB35 978 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 FOXD4L3Q6VB84 417 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 OLIG1Q8TAK6 271 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 RSPRY1Q96DX4 576 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 CHFRQ96EP1 664 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 TMEM176AQ96HP8 235 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 LRRC3BQ96PB8 259 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 STRBPQ96SI9 672 aaKnown RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 TRIM56Q9BRZ2 755 aaKnown RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 GGT7Q9UJ14 662 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 HDAC5Q9UQL6 1122 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 GINS2Q9Y248 185 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 MRPS23Q9Y3D9 190 aaKnown RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 PCDHA1Q9Y5I3 950 aa5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 HEMK1Q9Y5R4 338 aaPredicted RBP5.99□□□□□ -1.45
SBDSP1-204ENST00000453858 NOTCH1P46531 2555 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 LOC100289279A0A1B0GTE1 492 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 MINDY4BA8MYZ0 360 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 K7ELQ4 463 aaPredicted RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 ZNF263O14978 683 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 FBXO24O75426 580 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 APBB3O95704 486 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 CELA3AP09093 270 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 SLFN14P0C7P3 912 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 TSPY3P0CV98 308 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 TSPY8P0CW00 308 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 GLUD2P49448 558 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 RNASELQ05823 741 aaKnown RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 GFPT1Q06210 699 aaPredicted RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 FCHO2Q0JRZ9 810 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 CCDC173Q0VFZ6 552 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 MYO1EQ12965 1108 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 GRM4Q14833 912 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 DUOXA1Q1HG43 343 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 KIZQ2M2Z5 673 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 PREPLQ4J6C6 727 aaPredicted RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 USP39Q53GS9 565 aaKnown RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 TMEM196Q5HYL7 178 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 SPDYCQ5MJ68 293 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 HGSNATQ68CP4 663 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 FSTL4Q6MZW2 842 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 SYT13Q7L8C5 426 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 RASSF3Q86WH2 238 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 MCF2L2Q86YR7 1114 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 WDR63Q8IWG1 891 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 FRMD1Q8N878 549 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 DEPDC1BQ8WUY9 529 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 NXPE2Q96DL1 559 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 B3GALT6Q96L58 329 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 TMEM74Q96NL1 305 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 RUSC1Q9BVN2 902 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 PUS7LQ9H0K6 701 aaKnown RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 SMARCAD1Q9H4L7 1026 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 CBX8Q9HC52 389 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 FBRSL1Q9HCM7 1045 aaKnown RBP5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 CYP4F12Q9HCS2 524 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 SMC4Q9NTJ3 1288 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 STX8Q9UNK0 236 aa5.98□□□□□ -1.45
SBDSP1-204ENST00000453858 PDCD11Q14690 1871 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms