RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 CDKAL1Q5VV42 579 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 TRIM59Q8IWR1 403 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 ELMOD1Q8N336 334 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 SPPL2BQ8TCT7 592 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 ELMO3Q96BJ8 720 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 PKMYT1Q99640 499 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 CORO1BQ9BR76 489 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 VRTNQ9H8Y1 702 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 TMLHEQ9NVH6 421 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 FANCLQ9NW38 375 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.68■□□□□ 0.1
VPS16-205ENST00000453689 CEP72Q9P209 647 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 HSFX1Q9UBD0 423 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
VPS16-205ENST00000453689 TECTAO75443 2155 aa15.68■□□□□ 0.1
VPS16-205ENST00000453689 PATJQ8NI35 1801 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 SOAT2O75908 522 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 ASGR2P07307 311 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 EEF1GP26641 437 aaKnown RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 PCSK1P29120 753 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 TPM4P67936 248 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 PTPN21Q16825 1174 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 SLC5A9Q2M3M2 681 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 ZNF699Q32M78 642 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 HSP90AA4PQ58FG1 418 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 TCERG1LQ5VWI1 586 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 C2orf15Q8WU43 125 aaKnown RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 SLC35C1Q96A29 364 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 MRPL45Q9BRJ2 306 aaKnown RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 AVENQ9NQS1 362 aaPredicted RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 ABI2Q9NYB9 513 aaPredicted RBP15.67■□□□□ 0.1
VPS16-205ENST00000453689 EPS15L1Q9UBC2 864 aa15.67■□□□□ 0.1
VPS16-205ENST00000453689 HELZP42694 1942 aaKnown RBP15.66■□□□□ 0.1
VPS16-205ENST00000453689 MYO16Q9Y6X6 1858 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 KCNJ18B7U540 433 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 GOLGA6L19H0YKK7 550 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 ATP2C2O75185 946 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 TACC1O75410 805 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 CLSTN1O94985 981 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 HLA-DRAP01903 254 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 ZNF18P17022 549 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 LMO2P25791 158 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 GTF2H1P32780 548 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 PIK3CAP42336 1068 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 ALDH1A3P47895 512 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 GCLMP48507 274 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 PLD1Q13393 1074 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 KCNJ12Q14500 433 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 CCDC142Q17RM4 750 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 SGSM1Q2NKQ1 1148 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 MGAT5BQ3V5L5 792 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 TCP11X2Q5H9J9 407 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 ZNF667Q5HYK9 610 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 PRSS36Q5K4E3 855 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 LUZP1Q86V48 1076 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 CREBRFQ8IUR6 639 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 HS6ST3Q8IZP7 471 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 FGF13Q92913 245 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 ZNF512Q96ME7 567 aaPredicted RBP15.66■□□□□ 0.1
VPS16-205ENST00000453689 SEPT5Q99719 369 aaPredicted RBP15.66■□□□□ 0.1
VPS16-205ENST00000453689 HSD3B7Q9H2F3 369 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 MMRN2Q9H8L6 949 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 TMEM8AQ9HCN3 771 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 GTF3C4Q9UKN8 822 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 CDH9Q9ULB4 789 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 CDH7Q9ULB5 785 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 NME7Q9Y5B8 376 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 PCDHB5Q9Y5E4 795 aa15.66■□□□□ 0.1
VPS16-205ENST00000453689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.66■□□□□ 0.18e-6■■■■□ 20.4
VPS16-205ENST00000453689 MYBPHLA2RUH7 354 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 FAM163BP0C2L3 166 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 HAPLN1P10915 354 aaPredicted RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 LAMP2P13473 410 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 ATF6P18850 670 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 CCR2P41597 374 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 TUFMP49411 452 aaKnown RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 MXI1P50539 228 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 EPHB3P54753 998 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 PSMC1P62191 440 aaKnown RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 NFE2Q16621 373 aaPredicted RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 IQCEQ6IPM2 695 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 FAM171BQ6P995 826 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 PDZD4Q76G19 769 aaPredicted RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 ANKRD20A12PQ8NF67 263 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 ING5Q8WYH8 240 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 TCEAL4Q96EI5 215 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 SYT15Q9BQS2 421 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 PI4K2AQ9BTU6 479 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 SNX25Q9H3E2 840 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 SORCS3Q9UPU3 1222 aa15.65■□□□□ 0.1
VPS16-205ENST00000453689 MRPS23Q9Y3D9 190 aaKnown RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 ZFP37Q9Y6Q3 630 aaPredicted RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 KIF26AQ9ULI4 1882 aaPredicted RBP15.65■□□□□ 0.1
VPS16-205ENST00000453689 NRG2O14511 850 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms