RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 TMEM143Q96AN5 459 aa16.54■□□□□ 0.24
TRA2B-205ENST00000453386 MANSC1Q9H8J5 431 aa16.54■□□□□ 0.24
TRA2B-205ENST00000453386 CYP26B1Q9NR63 512 aa16.54■□□□□ 0.24
TRA2B-205ENST00000453386 HEY2Q9UBP5 337 aa16.54■□□□□ 0.24
TRA2B-205ENST00000453386 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 TBXAS1P24557 533 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 CCDC142Q17RM4 750 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 TSNAXIP1Q2TAA8 658 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 SMTNL2Q2TAL5 461 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 KHDC1Q4VXA5 237 aaKnown RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 ENDOVQ8N8Q3 282 aaKnown RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 MIPEPQ99797 713 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 ZWILCHQ9H900 591 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 NFASCO94856 1347 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 LRRIQ4A6NIV6 560 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 PPP1R12AO14974 1030 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 ATP6V1C1P21283 382 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 CDKN2BP42772 138 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 GDF10P55107 478 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 PRKCEQ02156 737 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 NCOA4Q13772 614 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 BAATQ14032 418 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 CDCA2Q69YH5 1023 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 FBXO36Q8NEA4 188 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 DNAJC9Q8WXX5 260 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 DCLRE1BQ9H816 532 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 SAR1AQ9NR31 198 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 A6NHS1 94 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 HAUS5O94927 633 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 CALB1P05937 261 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
TRA2B-205ENST00000453386 ENPEPQ07075 957 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 GRIK3Q13003 919 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 KCNT1Q5JUK3 1230 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 PPIL6Q8IXY8 311 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 IMPG2Q9BZV3 1241 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 HAPLN2Q9GZV7 340 aa16.53■□□□□ 0.24
TRA2B-205ENST00000453386 H0YCG3 227 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 WDR46O15213 610 aaKnown RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 CCDC22O60826 627 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 STBD1O95210 358 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 PSAPP07602 524 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 NR3C2P08235 984 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 LINGO3P0C6S8 592 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 OTUD4Q01804 1114 aaKnown RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 PPP1R2P3Q6NXS1 205 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 RSBN1LQ6PCB5 846 aaPredicted RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 PCGF5Q86SE9 256 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 CCDC60Q8IWA6 550 aaPredicted RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 RDM1Q8NG50 284 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 ACTL9Q8TC94 416 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 RSAD2Q8WXG1 361 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 CADM1Q9BY67 442 aaKnown RBP16.52■□□□□ 0.24
TRA2B-205ENST00000453386 GINM1Q9NU53 330 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 ARL8BQ9NVJ2 186 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 KANSL3Q9P2N6 904 aa16.52■□□□□ 0.24
TRA2B-205ENST00000453386 DPPA5A6NC42 116 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 K7ERI5 159 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 IRX1P78414 480 aaPredicted RBP16.52■□□□□ 0.23
TRA2B-205ENST00000453386 RASA2Q15283 850 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 CTC1Q2NKJ3 1217 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 ADGRD1Q6QNK2 874 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 DSTYKQ6XUX3 929 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 CPT1BQ92523 772 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 PTPRN2Q92932 1015 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 TSSK1BQ9BXA7 367 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 LNPEPQ9UIQ6 1025 aa16.52■□□□□ 0.23
TRA2B-205ENST00000453386 NDC80O14777 642 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 GYG2O15488 501 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 TBC1D12O60347 775 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 CST8O60676 142 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 DKC1O60832 514 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 MT-ND3P03897 115 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 CCND2P30279 289 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 ARFIP2P53365 341 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 KLHL38Q2WGJ6 581 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 SLC35B2Q8TB61 432 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 DDX56Q9NY93 547 aaKnown RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 FARP1Q9Y4F1 1045 aaPredicted RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 CLGNO14967 610 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 ATP4AP20648 1035 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 RTP1P59025 263 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 GHRHRQ02643 423 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 PIGHQ14442 188 aaPredicted RBP16.51■□□□□ 0.23
TRA2B-205ENST00000453386 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
TRA2B-205ENST00000453386 VPS52Q8N1B4 723 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms