RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TMEM86AQ8N2M4 240 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 TMEM35BQ8NCS4 154 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 C1orf131Q8NDD1 294 aaKnown RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 TRIM58Q8NG06 486 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 URGCPQ8TCY9 931 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 RSPH1Q8WYR4 309 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF653Q96CK0 615 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 SUSD3Q96L08 255 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 HEXIM2Q96MH2 286 aaKnown RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 NAPGQ99747 312 aaPredicted RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 RTP3Q9BQQ7 232 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 TLR10Q9BXR5 811 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 PDCL3Q9H2J4 239 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 SNX25Q9H3E2 840 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 TJP2Q9UDY2 1190 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 DNAJB4Q9UDY4 337 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 CNOT8Q9UFF9 292 aaKnown RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 CHORDC1Q9UHD1 332 aaPredicted RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 JRKLQ9Y4A0 524 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 MKI67P46013 3256 aaKnown RBP6.37□□□□□ -1.39
SDC4P-201ENST00000453285 ANAPC1Q9H1A4 1944 aa6.37□□□□□ -1.39
SDC4P-201ENST00000453285 PLXNA3P51805 1871 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ABHD14A-ACY1A0A1B0GW23 586 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CTAGE9A4FU28 777 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 I3L4J1 428 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ENC1O14682 589 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 RIOK3O14730 519 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NRP1O14786 923 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 HOXA2O43364 376 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NCK2O43639 380 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 BUB1BO60566 1050 aaPredicted RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ATP2C2O75185 946 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 DGKIO75912 1065 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 URI1O94763 535 aaPredicted RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 B3GAT3O94766 335 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 MYBL1P10243 752 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CSF2RAP15509 400 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 RAG1P15918 1043 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PRLRP16471 622 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PTPN1P18031 435 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TKTP29401 623 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NOP2P46087 812 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NSFP46459 744 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 GABRB2P47870 512 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 LHX1P48742 406 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 RPL34P49207 117 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NAP1L1P55209 391 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 GSCP56915 257 aaPredicted RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 IKBKEQ14164 716 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 STILQ15468 1287 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 IFI16Q16666 785 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CCDC142Q17RM4 750 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 GOLGA7BQ2TAP0 167 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PTPN20Q4JDL3 420 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PAN2Q504Q3 1202 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PPP1R15BQ5SWA1 713 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PPP1R2P3Q6NXS1 205 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 MMS22LQ6ZRQ5 1243 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 C16orf59Q7L2K0 433 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PHLDB2Q86SQ0 1253 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NT5DC3Q86UY8 548 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TTC30AQ86WT1 665 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ERICH1Q86X53 443 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 UBA3Q8TBC4 463 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 SPATA18Q8TC71 538 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 HASPINQ8TF76 798 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 SLC35F5Q8WV83 523 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TOP1MTQ969P6 601 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ZNF689Q96CS4 500 aaPredicted RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TRIM11Q96F44 468 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CALR3Q96L12 384 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CPXM1Q96SM3 734 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PKMYT1Q99640 499 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 C11orf70Q9BRQ4 267 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 NUP85Q9BW27 656 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 GOLPH3Q9H4A6 298 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CRTAC1Q9NQ79 661 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 FAM49BQ9NUQ9 324 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 MARCH5Q9NX47 278 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 DDX43Q9NXZ2 648 aaKnown RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 ADAM22Q9P0K1 906 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 CTTNBP2NLQ9P2B4 639 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 UVRAGQ9P2Y5 699 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 HCSTQ9UBK5 93 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TSPAN16Q9UKR8 245 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 LRFN2Q9ULH4 789 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 PCDHB8Q9UN66 801 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 TIMM13Q9Y5L4 95 aaPredicted RBP6.36□□□□□ -1.39
SDC4P-201ENST00000453285 MRFAP1Q9Y605 127 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 DOCK6Q96HP0 2047 aa6.36□□□□□ -1.39
SDC4P-201ENST00000453285 MYO9BQ13459 2157 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 NUP205Q92621 2012 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 ATG2AQ2TAZ0 1938 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 MYBPHLA2RUH7 354 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TBKBP1A7MCY6 615 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 M0QYV0 167 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 TULP2O00295 520 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 GJB6O95452 261 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 FTCDO95954 541 aa6.35□□□□□ -1.39
SDC4P-201ENST00000453285 EFEMP2O95967 443 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms