RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MRPS23Q9Y3D9 190 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 YIPF1Q9Y548 306 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 CLUHO75153 1309 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 TNFRSF10AO00220 468 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 MICAL2O94851 1124 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 VNN2O95498 520 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 FGF19O95750 216 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 RHOP08100 348 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 MAGEA11P43364 429 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 MTIF2P46199 727 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CYP27A1Q02318 531 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 STX1AQ16623 288 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CFAP221Q4G0U5 840 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CBWD6Q4V339 395 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CBWD3Q5JTY5 395 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CBWD5Q5RIA9 395 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 SPOPLQ6IQ16 392 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 VSTM1Q6UX27 236 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 PDZD4Q76G19 769 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 DNAJB7Q7Z6W7 309 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CNOT6LQ96LI5 555 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 NECAB3Q96P71 396 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 NAT10Q9H0A0 1025 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.47□□□□□ -0.89
COL8A1-203ENST00000452013 TMLHEQ9NVH6 421 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 CDH22Q9UJ99 828 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
COL8A1-203ENST00000452013 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.89
COL8A1-203ENST00000452013 ATP2C2O75185 946 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 TPM2P07951 284 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CSH1P0DML2 217 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CSH2P0DML3 217 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 MYL4P12829 197 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 ALADP13716 330 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CYP2F1P24903 491 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 GRIK1P39086 918 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 ASPAP45381 313 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 RAP1GAPP47736 663 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 NDST1P52848 882 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 PSMC1P62191 440 aaKnown RBP9.46□□□□□ -0.9
COL8A1-203ENST00000452013 NTHL1P78549 312 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
COL8A1-203ENST00000452013 SCARA5Q6ZMJ2 495 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 SCN4BQ8IWT1 228 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 B3GALNT2Q8NCR0 500 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 GIPC2Q8TF65 315 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 TATDN2Q93075 761 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 PSMG2Q969U7 264 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 PCED1BQ96HM7 432 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 NT5C1BQ96P26 610 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 MED15Q96RN5 788 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 PKMYT1Q99640 499 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 SDCBP2Q9H190 292 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CRTAC1Q9NQ79 661 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 ASAH2Q9NR71 780 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 EHD2Q9NZN4 543 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CEP72Q9P209 647 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 CDH7Q9ULB5 785 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
COL8A1-203ENST00000452013 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 MYH11P35749 1972 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 ESPNB1AK53 854 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 C2CD4DB7Z1M9 353 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 TRIM66O15016 1216 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 HCRTO43612 131 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 LAMP2P13473 410 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 CD58P19256 250 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 BDNFP23560 247 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
COL8A1-203ENST00000452013 ANXA13P27216 316 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 EPHA5P54756 1037 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 INCA1Q0VD86 236 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 CUL2Q13617 745 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 MAN2A1Q16706 1144 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 DDR2Q16832 855 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 ZSCAN23Q3MJ62 389 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 LRSAM1Q6UWE0 723 aa9.45□□□□□ -0.9
COL8A1-203ENST00000452013 GET4Q7L5D6 327 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms