RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 RSPH1Q8WYR4 309 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 RABGGTAQ92696 567 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 TNIP3Q96KP6 325 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 CASD1Q96PB1 797 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 GOLPH3Q9H4A6 298 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 PRDM10Q9NQV6 1147 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 CHORDC1Q9UHD1 332 aaPredicted RBP11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 CYTH4Q9UIA0 394 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 HYOU1Q9Y4L1 999 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 SCINQ9Y6U3 715 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 M0QZQ0 153 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 B3GAT3O94766 335 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 KIF4AO95239 1232 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 TIMP1P01033 207 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PFKMP08237 780 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PDGFRBP09619 1106 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 TCP1P17987 556 aaKnown RBP11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 GTF2F1P35269 517 aaKnown RBP eCLIP11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 GABRB2P47870 512 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 LHX1P48742 406 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PDCLQ13371 301 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 RPS6KA1Q15418 735 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PTPN20Q4JDL3 420 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 LLGL2Q6P1M3 1020 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 UBE2Q1Q7Z7E8 422 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 TTC30AQ86WT1 665 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 B3GALNT2Q8NCR0 500 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 MSANTD4Q8NCY6 345 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 SUSD3Q96L08 255 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 MCOLN1Q9GZU1 580 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 MRPL47Q9HD33 250 aaKnown RBP11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 PARVAQ9NVD7 372 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 DSEQ9UL01 958 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
NDUFA3-209ENST00000451517 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 TRIM43BA6NCK2 446 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 CES2O00748 559 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 CAPN15O75808 1086 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 CCDC130P13994 396 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 TYMPP19971 482 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 BRCC3P46736 316 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 GATMP50440 423 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 RNASELQ05823 741 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 IKBKEQ14164 716 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 KIAA0319Q5VV43 1072 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 ABI1Q8IZP0 508 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 ANKRD52Q8NB46 1076 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 C3orf20Q8ND61 904 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 UBA3Q8TBC4 463 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 STK32AQ8WU08 396 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 TRIM43Q96BQ3 446 aaPredicted RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 HES6Q96HZ4 224 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 CPXM1Q96SM3 734 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 HNRNPABQ99729 332 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 LPIN3Q9BQK8 851 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 MRPL9Q9BYD2 267 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 WDR35Q9P2L0 1181 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 HESX1Q9UBX0 185 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 ANAPC7Q9UJX3 599 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 ALG6Q9Y672 507 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 SCN5AQ14524 2016 aa11.89□□□□□ -0.51
NDUFA3-209ENST00000451517 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 F8W810 466 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 I3L4J1 428 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 ATP2C2O75185 946 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 ERBB2P04626 1255 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 ITGB1P05556 798 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 ITGB8P26012 769 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 PCSK1P29120 753 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 BCAT1P54687 386 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 TAP1Q03518 808 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 ZNF268Q14587 947 aaPredicted RBP11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 MESDQ14696 234 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 CYP4A22Q5TCH4 519 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 METTL23Q86XA0 190 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 XYLT1Q86Y38 959 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 CEP112Q8N8E3 955 aa11.88□□□□□ -0.51
NDUFA3-209ENST00000451517 FEZF2Q8TBJ5 459 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms