RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MYBPHLA2RUH7 354 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 F11P03951 625 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 CCR3P51677 355 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 WDR44Q5JSH3 913 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 GPD1LQ8N335 351 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 MSANTD3Q96H12 275 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 IER2Q9BTL4 223 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 MTMR12Q9C0I1 747 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 EPC1Q9H2F5 836 aa29.16■■■□□ 2.26
USP42-204ENST00000451154 MAGED2Q9UNF1 606 aaPredicted RBP29.16■■■□□ 2.26
USP42-204ENST00000451154 KIF26AQ9ULI4 1882 aaPredicted RBP29.16■■■□□ 2.26
USP42-204ENST00000451154 CYP2F1P24903 491 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 CTHP32929 405 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 CXCL12P48061 93 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 NRLP54845 237 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 NLRP12P59046 1061 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 SATB1Q01826 763 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 E2F4Q16254 413 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 NFE2Q16621 373 aaPredicted RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 DDR2Q16832 855 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 FOXD4L5Q5VV16 416 aaPredicted RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 C1orf228Q6PIY5 440 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 ERMP1Q7Z2K6 904 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 OSTM1Q86WC4 334 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 RALGPS2Q86X27 583 aaPredicted RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 CMTM8Q8IZV2 173 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 TMEM86AQ8N2M4 240 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 CELF5Q8N6W0 485 aaKnown RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 MAB21L3Q8N8X9 362 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 FOXD4L4Q8WXT5 416 aaPredicted RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 TNMDQ9H2S6 317 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 KBTBD4Q9NVX7 518 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 GDAP2Q9NXN4 497 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 GTF3C4Q9UKN8 822 aa29.15■■■□□ 2.26
USP42-204ENST00000451154 SMG5Q9UPR3 1016 aaKnown RBP29.15■■■□□ 2.26
USP42-204ENST00000451154 DNAH14Q0VDD8 3507 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 CACNA1AO00555 2505 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 HCRTO43612 131 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 TMEM191BP0C7N4 346 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 HOXD13P35453 343 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 MYL7Q01449 175 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 LRRC32Q14392 662 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 PPP2R5DQ14738 602 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 PON2Q15165 354 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 DHX58Q96C10 678 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 ZNF396Q96N95 335 aaPredicted RBP29.14■■■□□ 2.26
USP42-204ENST00000451154 LRRC27Q9C0I9 530 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 GKN1Q9NS71 199 aa29.14■■■□□ 2.26
USP42-204ENST00000451154 THG1LQ9NWX6 298 aaKnown RBP29.14■■■□□ 2.26
USP42-204ENST00000451154 PPP6R2O75170 966 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 PLCB2Q00722 1185 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 CCDC142Q17RM4 750 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 INTS6LQ5JSJ4 861 aaKnown RBP29.13■■■□□ 2.25
USP42-204ENST00000451154 TXNDC8Q6A555 127 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 STXBP4Q6ZWJ1 553 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 CBWD2Q8IUF1 395 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 SPEM1Q8N4L4 309 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 OR5B17Q8NGF7 314 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 PKMYT1Q99640 499 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 TRIM9Q9C026 710 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 INTS13Q9NVM9 706 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 CCL26Q9Y258 94 aa29.13■■■□□ 2.25
USP42-204ENST00000451154 ZNF233A6NK53 670 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 CSH1P0DML2 217 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 CSH2P0DML3 217 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 AVPR1AP37288 418 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 SOWAHAQ2M3V2 549 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 Q6ZS52 159 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 ADGRF2Q8IZF7 708 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 TOP6BLQ8N6T0 577 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 LEO1Q8WVC0 666 aaPredicted RBP29.12■■■□□ 2.25
USP42-204ENST00000451154 ANKRD36BP1Q96IX9 119 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 PTPRJQ12913 1337 aa29.12■■■□□ 2.25
USP42-204ENST00000451154 KIAA0391O15091 583 aaKnown RBP29.11■■■□□ 2.25
USP42-204ENST00000451154 LHX1P48742 406 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 ASIC1P78348 528 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 ITPRIPL2Q3MIP1 535 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 DGKKQ5KSL6 1271 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 SHC4Q6S5L8 630 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 USP13Q92995 863 aaPredicted RBP29.11■■■□□ 2.25
USP42-204ENST00000451154 ABCB6Q9NP58 842 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 HSPBP1Q9NZL4 362 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 ZMYM5Q9UJ78 669 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 R3HCC1Q9Y3T6 440 aaKnown RBP29.11■■■□□ 2.25
USP42-204ENST00000451154 ATG2BQ96BY7 2078 aa29.11■■■□□ 2.25
USP42-204ENST00000451154 GABRDO14764 452 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 RPL10AP62906 217 aaKnown RBP29.1■■■□□ 2.25
USP42-204ENST00000451154 AMPD3Q01432 767 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 DMWDQ09019 674 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 LPAL2Q16609 132 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 DUOXA2Q1HG44 320 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 FOXD4L6Q3SYB3 417 aaPredicted RBP29.1■■■□□ 2.25
USP42-204ENST00000451154 FOXD4L3Q6VB84 417 aaPredicted RBP29.1■■■□□ 2.25
USP42-204ENST00000451154 IQUBQ8NA54 791 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 MRPS31Q92665 395 aaKnown RBP29.1■■■□□ 2.25
USP42-204ENST00000451154 SECISBP2LQ93073 1101 aaKnown RBP29.1■■■□□ 2.25
USP42-204ENST00000451154 HPDLQ96IR7 371 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 FAM83CQ9BQN1 747 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 CUEDC2Q9H467 287 aa29.1■■■□□ 2.25
USP42-204ENST00000451154 TDP1Q9NUW8 608 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms