RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GLP2RO95838 553 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 GLUD1P00367 558 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 PTPN1P18031 435 aaKnown RBP13.89□□□□□ -0.19
VPS33A-202ENST00000451053 PBX1P40424 430 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 GPR17Q13304 367 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 KCNC3Q14003 757 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 MDH1BQ5I0G3 518 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 ACOT1Q86TX2 421 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 PPFIBP1Q86W92 1011 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 UNC93AQ86WB7 457 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 DCP1BQ8IZD4 617 aaKnown RBP13.89□□□□□ -0.19
VPS33A-202ENST00000451053 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 ZNF461Q8TAF7 563 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 PGLYRP2Q96PD5 576 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 PLCB1Q9NQ66 1216 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
VPS33A-202ENST00000451053 FBXW11Q9UKB1 542 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 DNAJC12Q9UKB3 198 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 GTF3C4Q9UKN8 822 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 FHOD1Q9Y613 1164 aa13.89□□□□□ -0.19
VPS33A-202ENST00000451053 MTMR11A4FU01 709 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 SEC24AO95486 1093 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 PTMAP06454 111 aaKnown RBP13.88□□□□□ -0.19
VPS33A-202ENST00000451053 UCHL3P15374 230 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 RAD23BP54727 409 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 MFAP3P55082 362 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 GSDMDP57764 484 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 YWHAEP62258 255 aaKnown RBP13.88□□□□□ -0.19
VPS33A-202ENST00000451053 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 ADAM15Q13444 863 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 TPGS2Q68CL5 300 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 FAM171BQ6P995 826 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 CRYBG2Q8N1P7 616 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 TTC39CQ8N584 583 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 TTC9BQ8N6N2 239 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 ATAD1Q8NBU5 361 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 B3GALNT2Q8NCR0 500 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 KREMEN2Q8NCW0 462 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 NEK11Q8NG66 645 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 NT5C1AQ9BXI3 368 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 NAA15Q9BXJ9 866 aaKnown RBP13.88□□□□□ -0.19
VPS33A-202ENST00000451053 FAM124BQ9H5Z6 455 aaPredicted RBP13.88□□□□□ -0.19
VPS33A-202ENST00000451053 MAN1C1Q9NR34 630 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 AFF4Q9UHB7 1163 aaKnown RBP13.88□□□□□ -0.19
VPS33A-202ENST00000451053 PCDHB4Q9Y5E5 795 aa13.88□□□□□ -0.19
VPS33A-202ENST00000451053 RNF225M0QZC1 329 aaPredicted RBP13.87□□□□□ -0.19
VPS33A-202ENST00000451053 ATF2P15336 505 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 TRIM21P19474 475 aaKnown RBP13.87□□□□□ -0.19
VPS33A-202ENST00000451053 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
VPS33A-202ENST00000451053 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 FIGNQ5HY92 759 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 ENOSF1Q7L5Y1 443 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 SPC24Q8NBT2 197 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
VPS33A-202ENST00000451053 MYCBPAPQ8TBZ2 947 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 SHC3Q92529 594 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 MYLPFQ96A32 169 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 TMEM176AQ96HP8 235 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 RHOBTB2Q9BYZ6 727 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 EDEM3Q9BZQ6 932 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 CRISPLD1Q9H336 500 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 FAM49BQ9NUQ9 324 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 CLDND1Q9NY35 253 aa13.87□□□□□ -0.19
VPS33A-202ENST00000451053 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
VPS33A-202ENST00000451053 TRANK1O15050 2925 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CLDN5O00501 218 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 TBX10O75333 385 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 C1RP00736 705 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CALCAP01258 141 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 PNMA6AP0CW24 399 aaPredicted RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 KRT5P13647 590 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CCDC130P13994 396 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 RFX1P22670 979 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 LTBRP36941 435 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 ZNF132P52740 706 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CYP27A1Q02318 531 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 DLX2Q07687 328 aaPredicted RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 DUSP4Q13115 394 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 RAPGEF1Q13905 1077 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 DRAP1Q14919 205 aaPredicted RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 TMEM184AQ6ZMB5 413 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 EP400NLQ6ZTU2 488 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CNGA4Q8IV77 575 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 C12orf29Q8N999 325 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
VPS33A-202ENST00000451053 SLC7A14Q8TBB6 771 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 CASP10Q92851 521 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
VPS33A-202ENST00000451053 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms