RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 CDX2Q99626 313 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 SELENOOQ9BVL4 669 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 COL25A1Q9BXS0 654 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 TRIM6Q9C030 488 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 ZNF518BQ9C0D4 1074 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 ELOVL4Q9GZR5 314 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 WNT8AQ9H1J5 351 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 CXCL16Q9H2A7 254 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 STARD7Q9NQZ5 370 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 ZNF446Q9NWS9 450 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 HMGXB4Q9UGU5 601 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 ANAPC7Q9UJX3 599 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 TTC7AQ9ULT0 858 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 UBQLN1Q9UMX0 589 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 AGAP1Q9UPQ3 857 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 HES2Q9Y543 173 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 CEP83Q9Y592 693 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 ALG6Q9Y672 507 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 SCINQ9Y6U3 715 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 TTC3P53804 2025 aa6.13□□□□□ -1.43
TM9SF4-205ENST00000450829 TMEM265A0A087WTH1 108 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CCDC66A2RUB6 948 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CCDC188H7C350 402 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ARVCFO00192 962 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 PPEF2O14830 753 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 GRIN2DO15399 1336 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TLR3O15455 904 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MED7O43513 233 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 XPOTO43592 962 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SPOPO43791 374 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CEP104O60308 925 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ERLIN1O75477 346 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CABYRO75952 493 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SEC31AO94979 1220 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CALB1P05937 261 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CTSHP09668 335 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 KCNE1P15382 129 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MMP8P22894 467 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 DNAJB2P25686 324 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TNFRSF8P28908 595 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SSTR3P32745 418 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MAN1A1P33908 653 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CDH8P55286 799 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MYO1EQ12965 1108 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CLUL1Q15846 466 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 PTPN20Q4JDL3 420 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ZNF394Q53GI3 561 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 GLE1Q53GS7 698 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 FAM47CQ5HY64 1035 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 GLRA4Q5JXX5 417 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 RASIP1Q5U651 963 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 C9orf57Q5W0N0 161 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CCDC70Q6NSX1 233 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 LLGL2Q6P1M3 1020 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MMS22LQ6ZRQ5 1243 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 C16orf59Q7L2K0 433 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 UBL4BQ8N7F7 174 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SLC43A3Q8NBI5 491 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 PCSK9Q8NBP7 692 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TMEM35BQ8NCS4 154 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 KRT35Q92764 455 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 C18orf25Q96B23 403 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 BTBD6Q96KE9 485 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ZNF560Q96MR9 790 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TOX2Q96NM4 488 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 APOL6Q9BWW8 343 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TRIM7Q9C029 511 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 LHX5Q9H2C1 402 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 MRPL47Q9HD33 250 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ARFGAP3Q9NP61 516 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 TMEM39AQ9NV64 488 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 ADAM22Q9P0K1 906 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 CHORDC1Q9UHD1 332 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 BARX2Q9UMQ3 279 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 IPPQ9Y573 584 aa6.12□□□□□ -1.43
TM9SF4-205ENST00000450829 SHROOM3Q8TF72 1996 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 ATG2AQ2TAZ0 1938 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 SMIM28A0A1B0GU29 152 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 DCDC2CA8MYV0 355 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 BHMG1C9JSJ3 638 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 M0QYV0 167 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 O00370 1275 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 PIRO00625 290 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 PTGESO14684 152 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 PSTPIP1O43586 416 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 CAND2O75155 1236 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 RPS6KA5O75582 802 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 MICAL2O94851 1124 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 PROSCO94903 275 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 HEXIM1O94992 359 aaKnown RBP6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 TIMP1P01033 207 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 CD4P01730 458 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 CHRNA1P02708 482 aa6.11□□□□□ -1.43
TM9SF4-205ENST00000450829 VDRP11473 427 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms