RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 VPS37CA5D8V6 355 aaPredicted RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 NOL4O94818 638 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 ITGB3P05106 788 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 CSH1P0DML2 217 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 CSH2P0DML3 217 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 PDCP20941 246 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 GARTP22102 1010 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 HOXC13P31276 330 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 AVPR1AP37288 418 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 GPR15P49685 360 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 CASP5P51878 434 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 TFAMQ00059 246 aaKnown RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 TSPY1Q01534 308 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 RESTQ13127 1097 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 RRAGBQ5VZM2 374 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 TMEM86AQ8N2M4 240 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 MAB21L3Q8N8X9 362 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 NETO1Q8TDF5 533 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 MYRFLQ96LU7 910 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 KIF9Q9HAQ2 790 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 TDP1Q9NUW8 608 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 CITO14578 2027 aa12.53□□□□□ -0.4
SS18L1-203ENST00000450482 PDCD11Q14690 1871 aaKnown RBP12.53□□□□□ -0.4
SS18L1-203ENST00000450482 CCDC163A0A0D9SF12 145 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 DCDC2BA2VCK2 349 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 SLC30A4O14863 429 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 EXTL3O43909 919 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TADA3O75528 432 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 GCNT3O95395 438 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TXLNAP40222 546 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 BFSP1Q12934 665 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 ALCAMQ13740 583 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 RUNX3Q13761 415 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 CFAP221Q4G0U5 840 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 INTS6LQ5JSJ4 861 aaKnown RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TXNDC8Q6A555 127 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 HEATR6Q6AI08 1181 aaKnown RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 SCARA3Q6AZY7 606 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TRIM68Q6AZZ1 485 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 FSTL4Q6MZW2 842 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 PKN3Q6P5Z2 889 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 PRR23CQ6ZRP0 262 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 MRPS31Q92665 395 aaKnown RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 CLIC6Q96NY7 704 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 FGFBP2Q9BYJ0 223 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TBC1D7Q9P0N9 293 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 SIX4Q9UIU6 781 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 ITGA11Q9UKX5 1188 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 AGAP1Q9UPQ3 857 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
SS18L1-203ENST00000450482 TSC2P49815 1807 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 GABRDO14764 452 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 HUS1O60921 280 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 ACAT1P24752 427 aaKnown RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 CYP2F1P24903 491 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 RPL10AP62906 217 aaKnown RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 PDGFRLQ15198 375 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 DDR2Q16832 855 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 FAM173BQ6P4H8 233 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 OSTM1Q86WC4 334 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
SS18L1-203ENST00000450482 CACTINQ8WUQ7 758 aaKnown RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 FUBP3Q96I24 572 aaKnown RBP eCLIP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
SS18L1-203ENST00000450482 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 A0A087X0B3 334 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.5□□□□□ -0.41
SS18L1-203ENST00000450482 ATG13O75143 517 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 ARSAP15289 507 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 SYT1P21579 422 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 RBP5P82980 135 aa12.5□□□□□ -0.41
SS18L1-203ENST00000450482 AMPD2Q01433 879 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms