RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CXCL12P48061 93 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 GPR17Q13304 367 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 MYBPC2Q14324 1141 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 SURF1Q15526 300 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 KMT5BQ4FZB7 885 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 LMBRD2Q68DH5 695 aaPredicted RBP18.87■□□□□ 0.61
FAM3A-216ENST00000449971 VITQ6UXI7 678 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 PRR23CQ6ZRP0 262 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 THEM5Q8N1Q8 247 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 ELMOD1Q8N336 334 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 C1orf127Q8N9H9 656 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 IRF7Q92985 503 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 ZSWIM3Q96MP5 696 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF560Q96MR9 790 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 SLITRK6Q9H5Y7 841 aa18.87■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF334Q9HCZ1 680 aaPredicted RBP18.87■□□□□ 0.61
FAM3A-216ENST00000449971 RALYQ9UKM9 306 aaKnown RBP18.87■□□□□ 0.61
FAM3A-216ENST00000449971 PDCD11Q14690 1871 aaKnown RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 A0A1W2PQ27 194 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 A0A1W2PQ64 194 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 A0A1W2PQD8 194 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF197O14709 1029 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 NUCB2P80303 420 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 RBP5P82980 135 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 TWF1Q12792 350 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 KNOP1Q1ED39 458 aaKnown RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 PRSS36Q5K4E3 855 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 CYP4A22Q5TCH4 519 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 WSCD1Q658N2 575 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 GPIHBP1Q8IV16 184 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF687Q8N1G0 1237 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ANKRD36BP1Q96IX9 119 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF512Q96ME7 567 aaPredicted RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ASB16Q96NS5 453 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 TMEM209Q96SK2 561 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 MTMR12Q9C0I1 747 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 RBM12Q9NTZ6 932 aaKnown RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 ITGA11Q9UKX5 1188 aa18.86■□□□□ 0.61
FAM3A-216ENST00000449971 R3HCC1Q9Y3T6 440 aaKnown RBP18.86■□□□□ 0.61
FAM3A-216ENST00000449971 CNOT1A5YKK6 2376 aaKnown RBP18.85■□□□□ 0.61
FAM3A-216ENST00000449971 RALGAPA1Q6GYQ0 2036 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 FAM237AA0A1B0GTK4 181 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 ZNF263O14978 683 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 HRO43593 1189 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 TNNC2P02585 160 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 PSMC3P17980 439 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 BFSP1Q12934 665 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 STK4Q13043 487 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 DUSP4Q13115 394 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 PSMD2Q13200 908 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 SNRNP35Q16560 246 aaKnown RBP18.85■□□□□ 0.61
FAM3A-216ENST00000449971 BMT2Q1RMZ1 405 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 IQCEQ6IPM2 695 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 CEP68Q76N32 757 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 AVENQ9NQS1 362 aaPredicted RBP18.85■□□□□ 0.61
FAM3A-216ENST00000449971 INTS13Q9NVM9 706 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 SLC27A5Q9Y2P5 690 aa18.85■□□□□ 0.61
FAM3A-216ENST00000449971 TICRRQ7Z2Z1 1910 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 VNN2O95498 520 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
FAM3A-216ENST00000449971 MYL1P05976 194 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 SOX9P48436 509 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CDR1P51861 262 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 KPNA1P52294 538 aaPredicted RBP18.84■□□□□ 0.61
FAM3A-216ENST00000449971 GAS6Q14393 721 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CCDC6Q16204 474 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 DUOXA2Q1HG44 320 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 SLC39A12Q504Y0 691 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CENPPQ6IPU0 288 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 YAF2Q8IY57 180 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 LRRC52Q8N7C0 313 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 ATAD1Q8NBU5 361 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 OR5B17Q8NGF7 314 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 OR10T2Q8NGX3 314 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 TTC8Q8TAM2 541 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 ZSCAN18Q8TBC5 510 aaPredicted RBP18.84■□□□□ 0.61
FAM3A-216ENST00000449971 SMARCD2Q92925 531 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
FAM3A-216ENST00000449971 GOLPH3LQ9H4A5 285 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CEP72Q9P209 647 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 CGNQ9P2M7 1197 aaKnown RBP18.84■□□□□ 0.61
FAM3A-216ENST00000449971 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
FAM3A-216ENST00000449971 MTMR11A4FU01 709 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 HUS1O60921 280 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 ZNF202O95125 648 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 DLATP10515 647 aaKnown RBP18.83■□□□□ 0.6
FAM3A-216ENST00000449971 CHRNB1P11230 501 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 HOXC13P31276 330 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 ALDH1A3P47895 512 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 EPHB3P54753 998 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 IL31Q6EBC2 164 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 KRBA2Q6ZNG9 492 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 Q6ZS52 159 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 KIAA0895Q8NCT3 520 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 CXorf38Q8TB03 319 aa18.83■□□□□ 0.6
FAM3A-216ENST00000449971 CSGALNACT1Q8TDX6 532 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms