RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
TOP3B-211ENST00000449704 CEP72Q9P209 647 aa16.79■□□□□ 0.28
TOP3B-211ENST00000449704 USTQ9Y2C2 406 aa16.79■□□□□ 0.28
TOP3B-211ENST00000449704 RHOP08100 348 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 HAPLN1P10915 354 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-211ENST00000449704 COL9A1P20849 921 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 CYP2F1P24903 491 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-211ENST00000449704 MDH1BQ5I0G3 518 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 SPATA2LQ8IUW3 424 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-211ENST00000449704 TRIM59Q8IWR1 403 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 HS6ST3Q8IZP7 471 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 FAM200AQ8TCP9 573 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 PKMYT1Q99640 499 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 DPEP3Q9H4B8 488 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 CRTAC1Q9NQ79 661 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 HSFX1Q9UBD0 423 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
TOP3B-211ENST00000449704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
TOP3B-211ENST00000449704 PTPN1P18031 435 aaKnown RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 ASPAP45381 313 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 FMO5P49326 533 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 MAPRE1Q15691 268 aaKnown RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 CAVIN1Q6NZI2 390 aaKnown RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 C4orf50Q6ZRC1 276 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 RNF135Q8IUD6 432 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 PLCD3Q8N3E9 789 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 ITFG1Q8TB96 612 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 GIPC2Q8TF65 315 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 MYADMQ96S97 322 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 DNAJC25Q9H1X3 360 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 LIMD1Q9UGP4 676 aa16.77■□□□□ 0.28
TOP3B-211ENST00000449704 MRPS23Q9Y3D9 190 aaKnown RBP16.77■□□□□ 0.28
TOP3B-211ENST00000449704 N4BP1O75113 896 aaKnown RBP16.76■□□□□ 0.27
TOP3B-211ENST00000449704 MYL4P12829 197 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 CD58P19256 250 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 MARSP56192 900 aaKnown RBP16.76■□□□□ 0.27
TOP3B-211ENST00000449704 CETN1Q12798 172 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 KCNH2Q12809 1159 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ORC1Q13415 861 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 VEPH1Q14D04 833 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 TAF12Q16514 161 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
TOP3B-211ENST00000449704 SDHAF4Q5VUM1 108 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 PDZD4Q76G19 769 aaPredicted RBP16.76■□□□□ 0.27
TOP3B-211ENST00000449704 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 GPR152Q8TDT2 470 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ING5Q8WYH8 240 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 TATDN2Q93075 761 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 CYP3A43Q9HB55 503 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ABCB6Q9NP58 842 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ASAH2Q9NR71 780 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ANO10Q9NW15 660 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.76■□□□□ 0.27
TOP3B-211ENST00000449704 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 ASB3Q9Y575 518 aa16.76■□□□□ 0.27
TOP3B-211ENST00000449704 C5orf42Q9H799 3197 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 ZNF197O14709 1029 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 AFPP02771 609 aaKnown RBP16.75■□□□□ 0.27
TOP3B-211ENST00000449704 BDNFP23560 247 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 MTIF2P46199 727 aaKnown RBP16.75■□□□□ 0.27
TOP3B-211ENST00000449704 GPR15P49685 360 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 NDST1P52848 882 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 RPL10AP62906 217 aaKnown RBP16.75■□□□□ 0.27
TOP3B-211ENST00000449704 LRMPQ12912 555 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 STX1AQ16623 288 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 DDR2Q16832 855 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 HSP90AA4PQ58FG1 418 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 DNAJB7Q7Z6W7 309 aaPredicted RBP16.75■□□□□ 0.27
TOP3B-211ENST00000449704 ACOT1Q86TX2 421 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 ITIH5Q86UX2 942 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 IRF2BP1Q8IU81 584 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 SCN4BQ8IWT1 228 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 ZDHHC14Q8IZN3 488 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 FUBP3Q96I24 572 aaKnown RBP eCLIP16.75■□□□□ 0.27
TOP3B-211ENST00000449704 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 BCO2Q9BYV7 579 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 THAP9Q9H5L6 903 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 CDH7Q9ULB5 785 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
TOP3B-211ENST00000449704 PMM2O15305 246 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 ATF6P18850 670 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 CFAP221Q4G0U5 840 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 UNC93AQ86WB7 457 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 FAM114A1Q8IWE2 563 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 FGF13Q92913 245 aa16.74■□□□□ 0.27
TOP3B-211ENST00000449704 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.27
TOP3B-211ENST00000449704 PSMG2Q969U7 264 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms