RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ATP2C2O75185 946 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 RB1P06400 928 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MMEP08473 750 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 GLUD2P49448 558 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 ERVK-21P61565 698 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 STILQ15468 1287 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 CTXN3Q4LDR2 81 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 TAF3Q5VWG9 929 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 RAD9BQ6WBX8 426 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 LNX1Q8TBB1 728 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 CCDC42Q96M95 316 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 TGS1Q96RS0 853 aaKnown RBP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 LPIN3Q9BQK8 851 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MTRRQ9UBK8 725 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 TNRC18O15417 2968 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 OR6C75A6NL08 312 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 KIF11P52732 1056 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 CNGA2Q16280 664 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 HS1BP3Q53T59 392 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 SPRED2Q7Z698 418 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 VPS52Q8N1B4 723 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MYCBPAPQ8TBZ2 947 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-203ENST00000449049 TMEM209Q96SK2 561 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 ZBP1Q9H171 429 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 DEF6Q9H4E7 631 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MSRAQ9UJ68 235 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 BACE2Q9Y5Z0 518 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MYBPHLA2RUH7 354 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 DDX3XO00571 662 aaKnown RBP eCLIP14.92□□□□□ -0.021e-14■■□□□ 13.5
SHMT2-203ENST00000449049 CFHP08603 1231 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 TNFAIP3P21580 790 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 TSPY1Q01534 308 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 MTF1Q14872 753 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 PSMD5Q16401 504 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 SLC18A3Q16572 532 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 PPP1R26Q5T8A7 1209 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-203ENST00000449049 KIAA1841Q6NSI8 718 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 PRSS55Q6UWB4 352 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-203ENST00000449049 LCLAT1Q6UWP7 414 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 GLYCTKQ8IVS8 523 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 CYFIP2Q96F07 1278 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 PCDHB18PQ96TA0 734 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 C11orf84Q9BUA3 381 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-203ENST00000449049 NKX2-4Q9H2Z4 354 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 FAM49BQ9NUQ9 324 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 ADAMTS1Q9UHI8 967 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 NENFQ9UMX5 172 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 A0A087X0T9 212 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 AKR1B10O60218 316 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 LCA5LO95447 670 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 URODP06132 367 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 FAM228BP0C875 321 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 CTSAP10619 480 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 CYLC1P35663 651 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-203ENST00000449049 UBE3AQ05086 875 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 CCDC142Q17RM4 750 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 MDH1BQ5I0G3 518 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 TRIM72Q6ZMU5 477 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 LRRTM3Q86VH5 581 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 HNRNPABQ99729 332 aaKnown RBP14.92□□□□□ -0.02
SHMT2-203ENST00000449049 TSPAN16Q9UKR8 245 aa14.92□□□□□ -0.02
SHMT2-203ENST00000449049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.92□□□□□ -0.023e-7■■□□□ 13.1
SHMT2-203ENST00000449049 ESPNB1AK53 854 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 MICAL2O94851 1124 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 NDUFA10O95299 355 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 CYP1A1P04798 512 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 CCDC130P13994 396 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 SMAD3P84022 425 aaKnown RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 MAPRE1Q15691 268 aaKnown RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 SLC8B1Q6J4K2 584 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 RSPO2Q6UXX9 243 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 PALB2Q86YC2 1186 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 DCP1BQ8IZD4 617 aaKnown RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 FUKQ8N0W3 1084 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 SPPL3Q8TCT6 385 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 PCED1BQ96HM7 432 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 B3GNT5Q9BYG0 378 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 LHX5Q9H2C1 402 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 GTF3C4Q9UKN8 822 aa14.91□□□□□ -0.02
SHMT2-203ENST00000449049 EPN1Q9Y6I3 576 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-203ENST00000449049 EIF3CLB5ME19 914 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 LILRB3O75022 631 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 LSM8O95777 96 aaKnown RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 OR4Q2P0C623 313 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 CDH5P33151 784 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-203ENST00000449049 GOLGA7BQ2TAP0 167 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 PKDCCQ504Y2 493 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 PAQR9Q6ZVX9 377 aa14.9□□□□□ -0.02
SHMT2-203ENST00000449049 SLC2A14Q8TDB8 520 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms