RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TSPY1Q01534 308 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 SLC39A12Q504Y0 691 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 SCARA3Q6AZY7 606 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 KLHL10Q6JEL2 608 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 PARM1Q6UWI2 310 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 INTS8Q75QN2 995 aaKnown RBP15.62■□□□□ 0.09
USP39-206ENST00000448971 GRASPQ7Z6J2 395 aaPredicted RBP15.62■□□□□ 0.09
USP39-206ENST00000448971 TCEAL8Q8IYN2 117 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 TMEM86AQ8N2M4 240 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 ELMOD1Q8N336 334 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 TOP6BLQ8N6T0 577 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 SUMF1Q8NBK3 374 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 PJA1Q8NG27 643 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 FOXQ1Q9C009 403 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 MMRN2Q9H8L6 949 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 YIPF1Q9Y548 306 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 CACNA1BQ00975 2339 aa15.62■□□□□ 0.09
USP39-206ENST00000448971 MED19A0JLT2 244 aaPredicted RBP15.61■□□□□ 0.09
USP39-206ENST00000448971 MTMR11A4FU01 709 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 TRIM49BA6NDI0 452 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 GOLGA6L22H0YM25 854 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 MAPK13O15264 365 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 SEC24AO95486 1093 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 TRIM49P0CI25 452 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 TRIM49CP0CI26 452 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 PIK3CAP42336 1068 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 DLG4P78352 724 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 NTHL1P78549 312 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 LRRC63Q05C16 580 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 GPR17Q13304 367 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 ZNF699Q32M78 642 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 TDRD10Q5VZ19 366 aaKnown RBP15.61■□□□□ 0.09
USP39-206ENST00000448971 RTL10Q7L3V2 364 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 DCLK2Q8N568 766 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 TMC2Q8TDI7 906 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 ZNF516Q92618 1163 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 SYAP1Q96A49 352 aaPredicted RBP15.61■□□□□ 0.09
USP39-206ENST00000448971 EEF2KMTQ96G04 330 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 MMS19Q96T76 1030 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 DDX23Q9BUQ8 820 aaKnown RBP15.61■□□□□ 0.09
USP39-206ENST00000448971 ZCWPW1Q9H0M4 648 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 DDX43Q9NXZ2 648 aaKnown RBP15.61■□□□□ 0.09
USP39-206ENST00000448971 CDH7Q9ULB5 785 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 CTNND2Q9UQB3 1225 aa15.61■□□□□ 0.09
USP39-206ENST00000448971 MAP3K13O43283 966 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 POU2F2P09086 479 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 ACAT1P24752 427 aaKnown RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 MYL6P60660 151 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 TWF1Q12792 350 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 PLD1Q13393 1074 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 NCOA4Q13772 614 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 MORC3Q14149 939 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 PABPC1LQ4VXU2 614 aaKnown RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 CENPPQ6IPU0 288 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 ZC3H14Q6PJT7 736 aaKnown RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 CLEC17AQ6ZS10 378 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 DCP1BQ8IZD4 617 aaKnown RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 SPATA18Q8TC71 538 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 RUBCNQ92622 972 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 FGF13Q92913 245 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 SHDQ96IW2 340 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 SEPT5Q99719 369 aaPredicted RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 MKNK1Q9BUB5 465 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 ABI2Q9NYB9 513 aaPredicted RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 DLL3Q9NYJ7 618 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 NXF1Q9UBU9 619 aaKnown RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 MAFFQ9ULX9 164 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 MTF2Q9Y483 593 aaPredicted RBP15.6■□□□□ 0.09
USP39-206ENST00000448971 MIA3Q5JRA6 1907 aa15.6■□□□□ 0.09
USP39-206ENST00000448971 KANSL1LA0AUZ9 987 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 SLC16A3O15427 465 aaKnown RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 CST3P01034 146 aaPredicted RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 CCNE1P24864 410 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 PCSK1P29120 753 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 ATICP31939 592 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 LHX1P48742 406 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 CDR1P51861 262 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 PMS1P54277 932 aaKnown RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 CLDN10P78369 228 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 FKBP3Q00688 224 aaKnown RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 PUM1Q14671 1186 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP39-206ENST00000448971 SOWAHAQ2M3V2 549 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 WDR72Q3MJ13 1102 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 MGAT5BQ3V5L5 792 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 SLC44A4Q53GD3 710 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 DCAF17Q5H9S7 520 aaPredicted RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 INTS6LQ5JSJ4 861 aaKnown RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 TCERG1LQ5VWI1 586 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 ANKRD40Q6AI12 368 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 IQCEQ6IPM2 695 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 SCARA5Q6ZMJ2 495 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 DGLUCYQ7Z3D6 616 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 TRIML1Q8N9V2 468 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 ATAD1Q8NBU5 361 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 DHTKD1Q96HY7 919 aaPredicted RBP15.59■□□□□ 0.09
USP39-206ENST00000448971 IMPG2Q9BZV3 1241 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 NUP62CLQ9H1M0 184 aa15.59■□□□□ 0.09
USP39-206ENST00000448971 CLSTN2Q9H4D0 955 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms