RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 CNR2P34972 360 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 CASP5P51878 434 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
TRA2A-203ENST00000448549 SDHAF4Q5VUM1 108 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 TXNDC8Q6A555 127 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.72■□□□□ 0.27
TRA2A-203ENST00000448549 BRSK2Q8IWQ3 736 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 HPS4Q9NQG7 708 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 ZMYM5Q9UJ78 669 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 L1RE1Q9UN81 338 aa16.72■□□□□ 0.27
TRA2A-203ENST00000448549 NCOR2Q9Y618 2525 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 GOLGA8IPA6NC78 632 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 OTOL1A6NHN0 477 aaPredicted RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 GOLGA8JA6NMD2 632 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 EXTL3O43909 919 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 HUS1O60921 280 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 IDEP14735 1019 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 PDCP20941 246 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 ACAT1P24752 427 aaKnown RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 TXLNAP40222 546 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 BFSP1Q12934 665 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 CUL4AQ13619 759 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 RUNX3Q13761 415 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 NFE2Q16621 373 aaPredicted RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 DDR2Q16832 855 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 PKN3Q6P5Z2 889 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 TDP1Q9NUW8 608 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 RBAKQ9NYW8 714 aaPredicted RBP16.71■□□□□ 0.27
TRA2A-203ENST00000448549 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 MYH11P35749 1972 aa16.71■□□□□ 0.27
TRA2A-203ENST00000448549 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 LRP3O75074 770 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CSH1P0DML2 217 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CSH2P0DML3 217 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 GARTP22102 1010 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CYP2F1P24903 491 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 HOXA6P31267 233 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 PXNP49023 591 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 RESTQ13127 1097 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 TMEM196Q5HYL7 178 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 FSTL4Q6MZW2 842 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CEP68Q76N32 757 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 MON1AQ86VX9 555 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 FAM160A2Q8N612 972 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 RIN3Q8TB24 985 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 MRPS31Q92665 395 aaKnown RBP16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CHFRQ96EP1 664 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 ACBD6Q9BR61 282 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 CBWD1Q9BRT8 395 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 PDE11AQ9HCR9 933 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 OLFML3Q9NRN5 406 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 GTF3C4Q9UKN8 822 aa16.7■□□□□ 0.26
TRA2A-203ENST00000448549 HCRTO43612 131 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 KRT19P08727 400 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 ARSAP15289 507 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 SYT1P21579 422 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 MYL7Q01449 175 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 GRSF1Q12849 480 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 CSRP2Q16527 193 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 CCDC142Q17RM4 750 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 CC2D1AQ6P1N0 951 aaPredicted RBP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 CCDC73Q6ZRK6 1079 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 WDR5BQ86VZ2 330 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 LRRC52Q8N7C0 313 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 NETO1Q8TDF5 533 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 LEO1Q8WVC0 666 aaPredicted RBP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 PKMYT1Q99640 499 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 FBRSL1Q9HCM7 1045 aaKnown RBP16.69■□□□□ 0.26
TRA2A-203ENST00000448549 ABCB6Q9NP58 842 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 PANK4Q9NVE7 773 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
TRA2A-203ENST00000448549 TSC2P49815 1807 aa16.68■□□□□ 0.26
TRA2A-203ENST00000448549 A0A087X0B3 334 aa16.68■□□□□ 0.26
TRA2A-203ENST00000448549 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
TRA2A-203ENST00000448549 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
TRA2A-203ENST00000448549 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
TRA2A-203ENST00000448549 PRPF6O94906 941 aaKnown RBP16.68■□□□□ 0.26
TRA2A-203ENST00000448549 STAT6P42226 847 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms