RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ASB7Q9H672 318 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 OBP2AQ9NY56 170 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 CPSF3Q9UKF6 684 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 DSEQ9UL01 958 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 COL4A3Q01955 1670 aa14.81□□□□□ -0.04
PDLIM2-213ENST00000448520 A0A1W2PRU2 124 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 MTMR11A4FU01 709 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 PRR5-ARHGAP8B1AHC4 643 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 NRG2O14511 850 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 DPYSL4O14531 572 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 CYP11A1P05108 521 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 OR4Q2P0C623 313 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 CHRNB1P11230 501 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 WEE1P30291 646 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 ARHGAP8P85298 464 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 FCHO2Q0JRZ9 810 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 TMEM132DQ14C87 1099 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 ARHGAP15Q53QZ3 475 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 C9orf57Q5W0N0 161 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 JADE1Q6IE81 842 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 TSSK4Q6SA08 328 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 TMC8Q8IU68 726 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 ARID3BQ8IVW6 561 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 CELF5Q8N6W0 485 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 TRIML1Q8N9V2 468 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 ATAD1Q8NBU5 361 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 PSMG2Q969U7 264 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 RAB23Q9ULC3 237 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 SMG5Q9UPR3 1016 aaKnown RBP14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 CTNND2Q9UQB3 1225 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 SLC27A5Q9Y2P5 690 aa14.8□□□□□ -0.04
PDLIM2-213ENST00000448520 DMXL1Q9Y485 3027 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ANO9A1A5B4 782 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 TRIM49BA6NDI0 452 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ANKRD63C9JTQ0 380 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ARNTLO00327 626 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 FRYLO94915 3013 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 CCNE1P24864 410 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 SCN1AP35498 2009 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 CXCL12P48061 93 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 GUCY2FP51841 1108 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 KPNA1P52294 538 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 PMS1P54277 932 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 STX17P56962 302 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 LRRC32Q14392 662 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 STX1AQ16623 288 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ARHGAP29Q52LW3 1261 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 SLC39A4Q6P5W5 647 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 GAREM2Q75VX8 874 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 TICRRQ7Z2Z1 1910 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 METTL23Q86XA0 190 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 THEM5Q8N1Q8 247 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 SPEM1Q8N4L4 309 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ZNF507Q8TCN5 953 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 C2orf15Q8WU43 125 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 MED15Q96RN5 788 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 CRISPLD1Q9H336 500 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ATXN3LQ9H3M9 355 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ST6GALNAC4Q9H4F1 302 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 ZMYM5Q9UJ78 669 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 GMEB2Q9UKD1 530 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 C2CD2Q9Y426 696 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 STYXL1Q9Y6J8 313 aa14.79□□□□□ -0.04
PDLIM2-213ENST00000448520 EIF3DO15371 548 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 LETM1O95202 739 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 TDGF1P13385 188 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 VEPH1Q14D04 833 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 BMT2Q1RMZ1 405 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 RSPO4Q2I0M5 234 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 DGKKQ5KSL6 1271 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 RALGPS2Q86X27 583 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 NT5DC4Q86YG4 428 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 TMEM130Q8N3G9 435 aa14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 AGO2Q9UKV8 859 aaKnown RBP14.78□□□□□ -0.04
PDLIM2-213ENST00000448520 MYBPHLA2RUH7 354 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 CYB561D2O14569 222 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 PPEF2O14830 753 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 TGFB1I1O43294 461 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 CCDC192P0DO97 292 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 GABRR2P28476 465 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 CDC25CP30307 473 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 CNR2P34972 360 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 ACOT2P49753 483 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 TAF6P49848 677 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 LMNB2Q03252 620 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 TAF12Q16514 161 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 GPR158Q5T848 1215 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 SYCP3Q8IZU3 236 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 GUF1Q8N442 669 aaKnown RBP14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 FAM200AQ8TCP9 573 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 NELFBQ8WX92 580 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 HVCN1Q96D96 273 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 GCNAQ96QF7 691 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 ACCSQ96QU6 501 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 TMEM209Q96SK2 561 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 ZCWPW1Q9H0M4 648 aa14.77□□□□□ -0.05
PDLIM2-213ENST00000448520 KCTD10Q9H3F6 313 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms