RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RFX1P22670 979 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 PRDX5P30044 214 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 ARHGAP8P85298 464 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 RELAQ04206 551 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 EFTUD2Q15029 972 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 EFHC2Q5JST6 749 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 PACS1Q6VY07 963 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 CATSPER3Q86XQ3 398 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 TRIM50Q86XT4 487 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 JDP2Q8WYK2 163 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 CNBD2Q96M20 576 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 WWP1Q9H0M0 922 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 INPP5FQ9Y2H2 1132 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 FRMPD2Q68DX3 1309 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 I3L4J1 428 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 SERPINB7O75635 380 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 PAX3P23760 479 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 STIP1P31948 543 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 COG2Q14746 738 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 CNGA3Q16281 694 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 PAOXQ6QHF9 649 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 ARID3BQ8IVW6 561 aaPredicted RBP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 TCHPQ9BT92 498 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 PLK2Q9NYY3 685 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 UBAP1Q9NZ09 502 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 SAP30BPQ9UHR5 308 aaKnown RBP9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 POLIQ9UNA4 740 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 HEY1Q9Y5J3 304 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
SYNPO2-204ENST00000448416 LRP5O75197 1615 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 E5RJQ4 531 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 F5H6K3 240 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 hCG_1984214I3L0E3 225 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 WDR46O15213 610 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ALOX15BO15296 676 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ZSCAN5DPP0CG00 497 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 KITP10721 976 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 KLRC2P26717 231 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 GPS1Q13098 491 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ARHGEF19Q8IW93 802 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 POU5F2Q8N7G0 328 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ZNF713Q8N859 430 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 RAB3IL1Q8TBN0 382 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PLEKHO2Q8TD55 490 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 USP6NLQ92738 828 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PAFAH2Q99487 392 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 C1orf21Q9H246 121 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 C17orf75Q9HAS0 396 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 HEMK1Q9Y5R4 338 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 MYOCOSA0A1B0GUC4 107 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 USP17L5A8MUK1 530 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 DENRO43583 198 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 TRPA1O75762 1119 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 CDH2P19022 906 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 NMT1P30419 496 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SSTR1P30872 391 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PHBP35232 272 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 NT5C2P49902 561 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 NR1H2P55055 460 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 CETN1Q12798 172 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SNAPC2Q13487 334 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 CCNIQ14094 377 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 TFDP1Q14186 410 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SUSD4Q5VX71 490 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 C3orf67Q6ZVT6 689 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 CHSY1Q86X52 802 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 OSCARQ8IYS5 282 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 DEPTORQ8TB45 409 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 JADE3Q92613 823 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 RRN3Q9NYV6 651 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 GOLGA8SH3BPF8 625 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 GOLGA8MH3BSY2 632 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PEX1O43933 1283 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 C6orf222P0C671 652 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SRGAP2CP0DJJ0 459 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SRGAP2BP0DMP2 458 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ALDH1A3P47895 512 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ARSEP51690 589 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 NANOGNBQ7Z5D8 188 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 ERI1Q8IV48 349 aaKnown RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 MYCT1Q8N699 235 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 EPS8L1Q8TE68 723 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 VPS50Q96JG6 964 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 FAM84BQ96KN1 310 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 FHDC1Q9C0D6 1143 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 SELENONQ9NZV5 590 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 MARCOQ9UEW3 520 aaPredicted RBP9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PCDHGB4Q9UN71 923 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 PCDHGB5Q9Y5G0 923 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 STK24Q9Y6E0 443 aa9.86□□□□□ -0.83
SYNPO2-204ENST00000448416 MATN2O00339 956 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 FBP2O00757 339 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 P4HA2O15460 535 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 MAFGO15525 162 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 DNAJA2O60884 412 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 BANF1O75531 89 aa9.85□□□□□ -0.83
SYNPO2-204ENST00000448416 PDGFRBP09619 1106 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms