RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 GALNT7Q86SF2 657 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RTKN2Q8IZC4 609 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 NECAB1Q8N987 351 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 OR5T2Q8NGG2 359 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 LBHD1Q9BQE6 289 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 DHX33Q9H6R0 707 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 EPB41L4AQ9HCS5 686 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 KLHL1Q9NR64 748 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TBC1D7Q9P0N9 293 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ASIC3Q9UHC3 531 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TCEAL9Q9UHQ7 104 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ANAPC2Q9UJX6 822 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MKLN1Q9UL63 735 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ROBO1Q9Y6N7 1651 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TMCC2O75069 709 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PAHP00439 452 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PLCG2P16885 1265 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PRKACAP17612 351 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PSMA3P25788 255 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PRDX6P30041 224 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MARSP56192 900 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 OTUD4Q01804 1114 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 DGKDQ16760 1214 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CCDC157Q569K6 752 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EARS2Q5JPH6 523 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 BEND3Q5T5X7 828 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZNF618Q5T7W0 954 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 RNASEH2BQ5TBB1 312 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 IKBIPQ70UQ0 350 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KLHL6Q8WZ60 621 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SLA2Q9H6Q3 261 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 AVENQ9NQS1 362 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 RAPGEFL1Q9UHV5 662 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BTBD3Q9Y2F9 522 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SLCO1B7G3V0H7 640 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EIF3FO00303 357 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZNF213O14771 459 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CD40LGP29965 261 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KPNA2P52292 529 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 KRT79Q5XKE5 535 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MPRIPQ6WCQ1 1025 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TPTE2Q6XPS3 522 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 DCLK2Q8N568 766 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TRIM56Q9BRZ2 755 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 GABBR1Q9UBS5 961 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KLHL3Q9UH77 587 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 V9GYQ6 96 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MAGI3Q5TCQ9 1506 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CEP152O94986 1710 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TK2O00142 265 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MAGEB2O15479 319 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CYP27B1O15528 508 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ATP1A1P05023 1023 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 CDC27P30260 824 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZNF76P36508 570 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 CARSP49589 748 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 KRT24Q2M2I5 525 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 HP1BP3Q5SSJ5 553 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 ELP2Q6IA86 826 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BARGINQ6ZT62 677 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 C12orf56Q8IXR9 622 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MB21D1Q8N884 522 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TDRD5Q8NAT2 981 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 USP13Q92995 863 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 PURBQ96QR8 312 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 FAM213AQ9BRX8 229 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ADNPQ9H2P0 1102 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SCPEP1Q9HB40 452 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BAG5Q9UL15 447 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ST14Q9Y5Y6 855 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ITSN1Q15811 1721 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 NFAT5O94916 1531 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SRGAP2O75044 1071 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TM7SF2O76062 418 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TFRCP02786 760 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 TRIM49P0CI25 452 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TRIM49CP0CI26 452 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SRGAP2CP0DJJ0 459 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 SRGAP2BP0DMP2 458 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TARSP26639 723 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 PROSER3Q2NL68 480 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EPC2Q52LR7 807 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 EFCAB2Q5VUJ9 269 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 BICRALQ6AI39 1079 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 DUS1LQ6P1R4 473 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 FAM228AQ86W67 206 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 KLHL7Q8IXQ5 586 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ASCC1Q8N9N2 400 aaKnown RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 TOP1MTQ969P6 601 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PALD1Q9ULE6 856 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 TESMINQ9Y4I5 508 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PCDH11YQ9BZA8 1340 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 FUOMA2VDF0 154 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 C2orf74A8MZ97 194 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 MAFO75444 373 aaPredicted RBP3.04□□□□□ -1.92
CHD9-203ENST00000447540 SOX30O94993 753 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 COPAP53621 1224 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 PRKAA2P54646 552 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ASIC2Q16515 512 aa3.04□□□□□ -1.92
CHD9-203ENST00000447540 ZFP69Q49AA0 526 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms