RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 RHBDL2Q9NX52 303 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 UBQLN1Q9UMX0 589 aaKnown RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 SNX12Q9UMY4 172 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 MYH10P35580 1976 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 A0A0B4J269 797 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 CCT8L1PA6NM43 557 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 LACTBL1A8MY62 500 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TADA2AO75478 443 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 LUC7L3O95232 432 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 PLEKP08567 350 aaPredicted RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 TPP2P29144 1249 aaPredicted RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 ALDH7A1P49419 539 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 CUL3Q13618 768 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 VWA3BQ502W6 1294 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 KRT39Q6A163 491 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 EPM2AIP1Q7L775 607 aaPredicted RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 ARHGAP22Q7Z5H3 698 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 MYLK4Q86YV6 388 aaPredicted RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 CD302Q8IX05 232 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 SLC43A3Q8NBI5 491 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 NT5C1BQ96P26 610 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 EPAS1Q99814 870 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 IL23AQ9NPF7 189 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.28□□□□□ -1.4
PROM1-201ENST00000447510 DLGAP2Q9P1A6 1054 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 C2CD2Q9Y426 696 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 SQORQ9Y6N5 450 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ABHD14A-ACY1A0A1B0GW23 586 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 DPPA5A6NC42 116 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 CASTOR2A6NHX0 329 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 SMNDC1O75940 238 aaKnown RBP eCLIP6.28□□□□□ -1.4
PROM1-201ENST00000447510 CD4P01730 458 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 COL6A1P12109 1028 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ATP2A2P16615 1042 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 GRM5P41594 1212 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 PPP2R2AP63151 447 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 CYP24A1Q07973 514 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 EHHADHQ08426 723 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TRIM14Q14142 442 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 MYBPC2Q14324 1141 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ZNF699Q32M78 642 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ZNF667Q5HYK9 610 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TMEM154Q6P9G4 183 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 SCARA5Q6ZMJ2 495 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 BRSK2Q8IWQ3 736 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 BORCS6Q96GS4 357 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ERVK-5Q9HDB9 667 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 NLRC4Q9NPP4 1024 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 HOMER3Q9NSC5 361 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 PCDH10Q9P2E7 1040 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 KANSL3Q9P2N6 904 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 MTUS1Q9ULD2 1270 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 RPS6KL1Q9Y6S9 549 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TLL1O43897 1013 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 PFDN1O60925 122 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 B3GAT3O94766 335 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 PFKMP08237 780 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 CD19P15391 556 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 FERP16591 822 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TCP1P17987 556 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 SLCO1A2P46721 670 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 AP3M2P53677 418 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 RBP5P82980 135 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 MCL1Q07820 350 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 FAM187BQ17R55 369 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 NOMO2Q5JPE7 1267 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ANKRD20A2Q5SQ80 823 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ANKRD20A1Q5TYW2 823 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 RASIP1Q5U651 963 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ANKRD20A3Q5VUR7 823 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 METTL23Q86XA0 190 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 MAB21L3Q8N8X9 362 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 DUSP9Q99956 384 aaKnown RBP6.28□□□□□ -1.4
PROM1-201ENST00000447510 MTMR12Q9C0I1 747 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 ECT2Q9H8V3 914 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 AAASQ9NRG9 546 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 DPP3Q9NY33 737 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 GCNT4Q9P109 453 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TBX21Q9UL17 535 aa6.28□□□□□ -1.4
PROM1-201ENST00000447510 TRIM43BA6NCK2 446 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 ENPP3O14638 875 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 NBNO60934 754 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
PROM1-201ENST00000447510 ITGB3P05106 788 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 MMEP08473 750 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 FGFR1P11362 822 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 ARPP19P56211 112 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 MUM1Q2TAK8 710 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 GLE1Q53GS7 698 aaKnown RBP6.27□□□□□ -1.41
PROM1-201ENST00000447510 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 TAS1R3Q7RTX0 852 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 SPATA21Q7Z572 469 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 ECHDC2Q86YB7 292 aa6.27□□□□□ -1.41
PROM1-201ENST00000447510 IFNLR1Q8IU57 520 aaPredicted RBP6.27□□□□□ -1.41
PROM1-201ENST00000447510 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms