RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 FAM200AQ8TCP9 573 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 SPPL2BQ8TCT7 592 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 GIPC2Q8TF65 315 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 MYLPFQ96A32 169 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 MCRS1Q96EZ8 462 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 SNX25Q9H3E2 840 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 DPEP3Q9H4B8 488 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 VRTNQ9H8Y1 702 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 KCNK12Q9HB15 430 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 ZNF334Q9HCZ1 680 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-204ENST00000446876 SORCS3Q9UPU3 1222 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 OBSL1O75147 1896 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 SLC16A3O15427 465 aaKnown RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 TACC1O75410 805 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 MOSPD3O75425 235 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 ASS1P00966 412 aaKnown RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 CYP2F1P24903 491 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 GNL1P36915 607 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 TCERG1LQ5VWI1 586 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 C2orf15Q8WU43 125 aaKnown RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 EDAQ92838 391 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 LRRC3Q9BY71 257 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 TMEM8AQ9HCN3 771 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 AVENQ9NQS1 362 aaPredicted RBP15.86■□□□□ 0.13
HDAC4-204ENST00000446876 ASAH2Q9NR71 780 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 HSFX1Q9UBD0 423 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 CDH9Q9ULB4 789 aa15.86■□□□□ 0.13
HDAC4-204ENST00000446876 NARSO43776 548 aaKnown RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 PPP1R2P41236 205 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 ASPAP45381 313 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 TUFMP49411 452 aaKnown RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 MXI1P50539 228 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 EPHA5P54756 1037 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 ENPEPQ07075 957 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 SMARCB1Q12824 385 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 PAK1Q13153 545 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 ORC1Q13415 861 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 MTMR3Q13615 1198 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 HTR4Q13639 388 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 DDR2Q16832 855 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 SGSM1Q2NKQ1 1148 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 MDH1BQ5I0G3 518 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 CYP4A22Q5TCH4 519 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 FAM171BQ6P995 826 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 PARM1Q6UWI2 310 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 DNAJB7Q7Z6W7 309 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 SPATA2LQ8IUW3 424 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 TRIML1Q8N9V2 468 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 SHKBP1Q8TBC3 707 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 GPT2Q8TD30 523 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 SEMA4DQ92854 862 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 FGF14Q92915 247 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 PSMG2Q969U7 264 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 RPP25Q9BUL9 199 aaKnown RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 C1QTNF1Q9BXJ1 281 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 NUP62CLQ9H1M0 184 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 APOBEC3GQ9HC16 384 aaKnown RBP15.85■□□□□ 0.13
HDAC4-204ENST00000446876 HMGXB4Q9UGU5 601 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 NUMBLQ9Y6R0 609 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 GREB1Q4ZG55 1949 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 DENND4CQ5VZ89 1909 aa15.85■□□□□ 0.13
HDAC4-204ENST00000446876 A0A1W2PRU2 124 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 A8MXQ7 604 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 MCCD1P59942 119 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-204ENST00000446876 NOP14P78316 857 aaKnown RBP15.84■□□□□ 0.13
HDAC4-204ENST00000446876 CYP27A1Q02318 531 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 TEAD2Q15562 447 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 CCDC40Q4G0X9 1142 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 CBWD6Q4V339 395 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 CBWD3Q5JTY5 395 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 TMEM31Q5JXX7 168 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 CBWD5Q5RIA9 395 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 STXBP5Q5T5C0 1151 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 KRT39Q6A163 491 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 TRIM67Q6ZTA4 783 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 PCED1BQ96HM7 432 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 ZSWIM3Q96MP5 696 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 KXD1Q9BQD3 176 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
HDAC4-204ENST00000446876 ARMCX3Q9UH62 379 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-204ENST00000446876 TRIOO75962 3097 aa15.83■□□□□ 0.13
HDAC4-204ENST00000446876 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 ANHXE9PGG2 379 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 ZNF197O14709 1029 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 GPR37L1O60883 481 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 PTPN1P18031 435 aaKnown RBP15.83■□□□□ 0.12
HDAC4-204ENST00000446876 BDNFP23560 247 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 GTF2H1P32780 548 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 TDGQ13569 410 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 VEPH1Q14D04 833 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 GAREM2Q75VX8 874 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 ITIH5Q86UX2 942 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 MYCBPAPQ8TBZ2 947 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 TAF4BQ92750 862 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 SLC35C1Q96A29 364 aa15.83■□□□□ 0.12
HDAC4-204ENST00000446876 CEP63Q96MT8 703 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms